⊟Summary[edit | edit source]

pan ID^?: SAUPAN002187000
symbol^?: gltD
synonym:
description^?: glutamate synthase subunit beta
- glutamate synthase subunit beta
- glutamate synthase
- glutamate synthase, small subunit
- glutamate synthase [NADPH] small chain (NADPH-GOGAT)
- glutamate synthase (NADPH) small subunit
- glutamate synthase, NADH/NADPH, small subunit domain protein
- Glutamate synthase [NADPH] small chain
- glutamate synthase beta subunit
- glutamate synthase small chain
- glutamate synthase small subunit
strand^?: +
coordinates^?: 2693839..2695302
synteny block^?: BlockID0014880
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL0515 (gltD)

N315:

SA0431 (gltD)

NCTC8325:

SAOUHSC_00436 (gltD)

Newman:

NWMN_0437 (gltD)

USA300_FPR3757:

SAUSA300_0446 (gltD)

04-02981:

SA2981_0448 (gltD)

08BA02176:

C248_0522 (gltB)

11819-97:

MS7_0446 (gltD)

6850:

RSAU_000406 (gltB)

71193:

ST398NM01_0538

ECT-R 2:

ECTR2_406 (gltD)

ED133:

SAOV_0490

ED98:

SAAV_0415 (gltD)

HO 5096 0412:

SAEMRSA15_03980 (gltB)

JH1:

SaurJH1_0507 (gltD)

JH9:

SaurJH9_0494 (gltD)

JKD6008:

SAA6008_00476 (gltD)

JKD6159:

SAA6159_00422 (gltD)

LGA251:

SARLGA251_04060 (gltB)

M013:

M013TW_0437

MRSA252:

SAR0472 (gltD)

MSHR1132:

SAMSHR1132_04170

MSSA476:

SAS0430 (gltD)

Mu3:

SAHV_0470 (gltD)

Mu50:

SAV0473 (gltD)

MW2:

MW0427 (gltD)

RF122:

SAB0422 (gltD)

ST398:

SAPIG0538

T0131:

SAT0131_00514

TCH60:

HMPREF0772_10050 (gltD)

TW20:

SATW20_05410 (gltB)

USA300_TCH1516:

USA300HOU_0473 (gltD)

VC40:

SAVC_01950 (gltD)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGARCMDCGTPFCQTGQQY
N315            MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGARCMDCGTPFCQTGQQY
NCTC8325        MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGARCMDCGTPFCQTGQQY
Newman          MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGARCMDCGTPFCQTGQQY
USA300_FPR3757  MGEFKGFMKYDKQYLGELSLVDRLKHHKAYQQRFTKEDASIQGARCMDCGTPFCQTGQQY
                ************************************************************

COL             GRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFTGRVCPAPCESACVMKINR
N315            GRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFTGRVCPAPCESACVMKINR
NCTC8325        GRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFTGRVCPAPCESACVMKINR
Newman          GRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFTGRVCPAPCESACVMKINR
USA300_FPR3757  GRETIGCPIGNYIPEWNDLVYHQDFKTAYERLSETNNFPDFTGRVCPAPCESACVMKINR
                ************************************************************

COL             ESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGSGPAGLAAAEELNLLGYQVTI
N315            ESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGSGPAGLTAAEELNLLGYQVTI
NCTC8325        ESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGSGPAGLAAAEELNLLGYQVTI
Newman          ESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGSGPAGLAAAEELNLLGYQVTI
USA300_FPR3757  ESIAIKGIERTIIDEAFENGWVAPKVPSRRRDEKVAIVGSGPAGLAAAEELNLLGYQVTI
                *********************************************:**************

COL             YERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGITFINGVEVGVDIDKATLESEYDA
N315            YERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGITFINGVEVGVDIDKATLESEYDA
NCTC8325        YERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGITFINGVEVGVDIDKATLESEYDA
Newman          YERARESGGLLMYGIPNMKLDKDVVRRRIKLMEEAGITFINGVEVGVDIDKATLESEYDA
USA300_FPR3757  YERARESGGLLMCGIPNMKLDKDVVRRRIKLMEEAGITFINGVEVGVDIDKATLESEYDA
                ************ ***********************************************

COL             IILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQLLNGEIDDITITAKDKNVIIIGAGD
N315            IILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQLLNGEIDDITITAKDKNVIIIGAGD
NCTC8325        IILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQLLNGEIDDITITAKDKNVIIIGAGD
Newman          IILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQLLNGEIDDITITAKDKNVIIIGAGD
USA300_FPR3757  IILCTGAQKGRDLPLEGRMGDGIHFAMDYLTEQTQLLNGEIDDITITAKDKNVIIIGAGD
                ************************************************************

COL             TGADCVATALRENCKSIVQFNKYTKLPEAITFTENASWPLAMPVFKMDYAHQEYEAKFGK
N315            TGADCVATALRENCKSIVQFNKYTKLPEAITFTENASWPLAMPVFKMDYAHQEYEAKFGK
NCTC8325        TGADCVATALRENCKSIVQFNKYTKLPEAITFTENASWPLAMPVFKMDYAHQEYEAKFGK
Newman          TGADCVATALRENCKSIVQFNKYTKLPEAITFTENASWPLAMPVFKMDYAHQEYEAKFGK
USA300_FPR3757  TGADCVATALRENCKSIVQFNKYTKLPEAITFTENASWPLAMPVFKMDYAHQEYEAKFGK
                ************************************************************

COL             EPRAYGVQTMRYDVDDKGHIRGLYTQILEQGENGMVMKEGPERFWPADLVLLSIGFEGTE
N315            EPRAYGVQTMRYDVDDKGHIRGLYTQILEQGENGMVMKEGPERFWPADLVLLSIGFEGTE
NCTC8325        EPRAYGVQTMRYDVDDKGHIRGLYTQILEQGENGMVMKEGPERFWPADLVLLSIGFEGTE
Newman          EPRAYGVQTMRYDVDDKGHIRGLYTQILEQGENGMVMKEGPERFWPADLVLLSIGFEGTE
USA300_FPR3757  EPRAYGVQTMRYDVDDKGHIRGLYTQILEQGENGMVMKEGPERFWPADLVLLSIGFEGTE
                ************************************************************

COL             PTVPNAFNIKTDRNRIVADDTNYQTNNEKVFAAGDARRGQSLVVWAIKEGRGVAKAVDQY
N315            PTVPNAFNIKTDRNRIVADDTNYQTNNEKVFAAGDARRGQSLVVWAIKEGRGVAKAVDQY
NCTC8325        PTVPNAFNIKTDRNRIVADDTNYQTNNEKVFAAGDARRGQSLVVWAIKEGRGVAKAVDQY
Newman          PTVPNAFNIKTDRNRIVADDTNYQTNNEKVFAAGDARRGQSLVVWAIKEGRGVAKAVDQY
USA300_FPR3757  PTVPNAFNIKTDRNRIVADDTNYQTNNEKVFAAGDARRGQSLVVWAIKEGRGVAKAVDQY
                ************************************************************

COL             LASKVCV
N315            LASKVCV
NCTC8325        LASKVCV
Newman          LASKVCV
USA300_FPR3757  LASKVCV
                *******

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]