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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001967000
- symbol?: selX
- synonym:
- description?: staphylococcal enterotoxin-like toxin X
- staphylococcal enterotoxin-like toxin X
- toxin
- enterotoxin
- putative enterotoxin
- staphylococcal enterotoxin, putative
- putative exotoxin
- putative staphylococcal enterotoxin
- staphylococcal enterotoxin
- superantigen-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2440531..2441142
- synteny block?: BlockID0013200
- occurrence?: in 85% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0369
08BA02176:
—
11819-97:
MS7_0360
6850:
RSAU_000315
71193:
—
ECT-R 2:
ECTR2_331
ED133:
SAOV_0394
ED98:
SAAV_0338
HO 5096 0412:
SAEMRSA15_03240
JH1:
SaurJH1_0429
JH9:
SaurJH9_0419
JKD6008:
SAA6008_00370
JKD6159:
SAA6159_00344
LGA251:
SARLGA251_03320
M013:
M013TW_0349
MRSA252:
—
MSHR1132:
SAMSHR1132_03430
MSSA476:
SAS0347
Mu3:
SAHV_0367
Mu50:
SAV0370
MW2:
MW0345
RF122:
SAB0321
ST398:
—
T0131:
SAT0131_00402
TCH60:
—
TW20:
SATW20_04380
USA300_TCH1516:
USA300HOU_0392
VC40:
SAVC_01605
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQDKQLQKVEEVPNNSEK
N315 MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQDKQLQKVEEVPNNSEK
NCTC8325 MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQDKQLQKVEEVPNNSEK
Newman MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQDKQLQKVEEVPNNSEK
USA300_FPR3757 MFKKYDSKNSIVLKSILSLGIIYGGTFGIYPKADASTQNSSSVQDKQLQKVEEVPNNSEK
************************************************************
COL ALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLEGTYTVAGRVYTPKRNITL
N315 ALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLEGTYTVADRVYTPKRNITL
NCTC8325 ALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLEGTYTVAGRVYTPKRNITL
Newman ALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLEGTYTVAGRVYTPKRNITL
USA300_FPR3757 ALVKKLYDRYSKDTINGKSNKSRNWVYSERPLNENQVRIHLEGTYTVAGRVYTPKRNITL
************************************************.***********
COL NKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKDGGKYTLESHKELQKDRENVK
N315 NKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKDGGKYTLESHKELQKDRENVK
NCTC8325 NKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKDGGKYTLESHKELQKDRENVK
Newman NKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKDGGKYTLESHKELQKDRENVK
USA300_FPR3757 NKEVVTLKELDHIIRFAHISYGLYMGEHLPKGNIVINTKDGGKYTLESHKELQKDRENVK
************************************************************
COL INTADIKNVTFKLVKSVNDIEQV
N315 INTADIKNVTFKLVKSVNDIEQV
NCTC8325 INTADIKNVTFKLVKSVNDIEQV
Newman INTADIKNVTFKLVKSVNDIEQV
USA300_FPR3757 INTADIKNVTFKLVKSVNDIEQV
***********************