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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001916000
- symbol?: rpsR
- synonym:
- description?: 30S ribosomal protein S18
- 30S ribosomal protein S18
- 30S ribosomalprotein S18p
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2400974..2401216
- synteny block?: BlockID0012880
- occurrence?: in 100% of 34 strains
rpsR : 30S ribosomal protein S18 [1]
• two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S18 is also known as "bS18" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0365 (rpsR)
08BA02176:
C248_0425 (rpsR)
11819-97:
MS7_0357 (rpsR)
6850:
RSAU_000312 (rpsR)
71193:
ST398NM01_0447
ECT-R 2:
ECTR2_328 (rpsR)
ED133:
SAOV_0391 (rpsR)
ED98:
SAAV_0335 (rpsR)
HO 5096 0412:
SAEMRSA15_03220 (rpsR)
JH1:
SaurJH1_0426 (rpsR)
JH9:
SaurJH9_0415 (rpsR)
JKD6008:
SAA6008_00344 (rpsR)
JKD6159:
SAA6159_00341 (rpsR)
JSNZ:
JSNZ_000321 (rpsR)
LGA251:
SARLGA251_03290 (rpsR)
M013:
M013TW_0347
MRSA252:
SAR0364 (rpsR)
MSHR1132:
SAMSHR1132_03400
MSSA476:
SAS0343 (rpsR)
Mu3:
SAHV_0364 (rpsR)
Mu50:
SAV0367 (rpsR)
MW2:
MW0343 (rpsR)
RF122:
SAB0318 (rpsR)
ST398:
SAPIG0447 (rpsR)
T0131:
SAT0131_00375 (coaE)
TCH60:
HMPREF0772_10127 (rpsR)
TW20:
SATW20_04350 (rpsR)
USA300_TCH1516:
USA300HOU_0389 (rpsR)
VC40:
SAVC_01585 (rpsR)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRML
N315 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRML
NCTC8325 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRML
Newman MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRML
USA300_FPR3757 MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRML
************************************************************
COL TTAIKRSRHMALLPYVKEEQ
N315 TTAIKRSRHMALLPYVKEEQ
NCTC8325 TTAIKRSRHMALLPYVKEEQ
Newman TTAIKRSRHMALLPYVKEEQ
USA300_FPR3757 TTAIKRSRHMALLPYVKEEQ
********************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)