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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001914000
- symbol?: rpsF
- synonym:
- description?: 30S ribosomal protein S6
- 30S ribosomal protein S6
- 30S ribosomal protein S6p
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2400102..2400398
- synteny block?: BlockID0012860
- occurrence?: in 100% of 34 strains
rpsF : 30S ribosomal protein S6 [1]
• two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S6 is also known as "bS6" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0363 (rpsF)
08BA02176:
C248_0422 (rpsF)
11819-97:
MS7_0355 (rpsF)
6850:
RSAU_000310 (rpsF)
71193:
ST398NM01_0445
ECT-R 2:
ECTR2_326 (rpsF)
ED133:
SAOV_0389 (rpsF)
ED98:
SAAV_0333 (rpsF)
HO 5096 0412:
SAEMRSA15_03200 (rpsF)
JH1:
SaurJH1_0424 (rpsF)
JH9:
SaurJH9_0413 (rpsF)
JKD6008:
SAA6008_00342 (rpsF)
JKD6159:
SAA6159_00339 (rpsF)
JSNZ:
JSNZ_000319 (rpsF)
LGA251:
SARLGA251_03270 (rpsF)
M013:
M013TW_0345
MRSA252:
SAR0362 (rpsF)
MSHR1132:
SAMSHR1132_03380
MSSA476:
SAS0341 (rpsF)
Mu3:
SAHV_0362 (rpsF)
Mu50:
SAV0365 (rpsF)
MW2:
MW0341 (rpsF)
RF122:
SAB0316 (rpsF)
ST398:
SAPIG0445 (rpsF)
T0131:
SAT0131_00373 (nrdR)
TCH60:
HMPREF0772_10129 (rpsF)
TW20:
SATW20_04330 (rpsF)
USA300_TCH1516:
USA300HOU_0387 (rpsF)
VC40:
SAVC_01575 (rpsF)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY
N315 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY
NCTC8325 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY
Newman MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY
USA300_FPR3757 MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFY
************************************************************
COL NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK
N315 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK
NCTC8325 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK
Newman NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK
USA300_FPR3757 NIVRVKSDNNKATDEFQRLAKISDDIIRYMVIREDEDK
**************************************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)