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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001902000
- symbol?: metC
- synonym:
- description?: cystathionine beta-lyase
- cystathionine beta-lyase
- trans-sulfuration enzyme family protein
- cystathionine gamma-synthase superfamily protein
- PLP-dependent transferase
- aminotransferase class-V family protein
- bifunctional cystathionine gamma-lyase/gamma-synthase
- Cys/Met metabolism PLP-dependent enzyme
- cystathionine beta-lyase (CBL) (Beta-cystathionase)(Cysteine lyase)
- cystathionine gamma-synthase
- cystathionine gamma-synthase (CGS) (O-succinylhomoserine(thiol)-lyase)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2391217..2392377
- synteny block?: BlockID0012750
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0356
08BA02176:
C248_0414
11819-97:
MS7_0348
6850:
RSAU_000303
71193:
ST398NM01_0438
ECT-R 2:
ECTR2_319
ED133:
SAOV_0382c
ED98:
SAAV_0326
HO 5096 0412:
SAEMRSA15_03130
JH1:
SaurJH1_0416
JH9:
SaurJH9_0406
JKD6008:
SAA6008_00335
JKD6159:
SAA6159_00332
LGA251:
SARLGA251_03200
M013:
M013TW_0337
MRSA252:
SAR0355
MSHR1132:
SAMSHR1132_03310
MSSA476:
SAS0334
Mu3:
SAHV_0355
Mu50:
SAV0358
MW2:
MW0334
RF122:
SAB0308c
ST398:
SAPIG0438
T0131:
SAT0131_00365
TCH60:
HMPREF0772_10136 (metC2)
TW20:
SATW20_04260
USA300_TCH1516:
USA300HOU_0379
VC40:
SAVC_01540
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKL
N315 MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKL
NCTC8325 MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKL
Newman MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKL
USA300_FPR3757 MTLSKETEVIFDWRRGVEYHSANPPLYDSSTFHQTSLGGDVKYDYARSGNPNRELLEEKL
************************************************************
COL ARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTV
N315 ARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTV
NCTC8325 ARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTV
Newman ARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTV
USA300_FPR3757 ARLEQGKFAFAFASGIAAISAVLLTFKSGDHVILPDDVYGGTFRLTEQILNRFNIEFTTV
************************************************************
COL DTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQ
N315 DTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQ
NCTC8325 DTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQ
Newman DTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQ
USA300_FPR3757 DTTKLEQIEGAIQSNTKLIYIETPSNPCFKITDIKAVSKIAEKHELLVAVDNTFMTPLGQ
************************************************************
COL SPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISDALYLIQNGTGNMLSAQDSWTLA
N315 SPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISEALYLIQNGTGNMLSAQDSWTLA
NCTC8325 SPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISDALYLIQNGTGNMLSAQDSWTLA
Newman SPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISDALYLIQNGTGNMLSAQDSWTLA
USA300_FPR3757 SPLLLGADIVIHSATKFLSGHSDLIAGAVITNNEAISDALYLIQNGTGNMLSAQDSWTLA
*************************************:**********************
COL KHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADE
N315 KHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADE
NCTC8325 KHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADE
Newman KHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADE
USA300_FPR3757 KHLKTFPIRFKQSVENAQKIVSFLIKQDEISEVYYPGLTTAHLEQAKNGGAVIGFRLADE
************************************************************
COL SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLED
N315 SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLED
NCTC8325 SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLED
Newman SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLED
USA300_FPR3757 SKAQQFVDALTLPLVSVSLGGVETILSHPATMSHAALPEEVRQERGITFGLFRLSVGLED
************************************************************
COL PDELIADIKYALKEAFNESIPHTIER
N315 PDELIADIKYALKEAFNESIPHTIER
NCTC8325 PDELIADIKYALKEAFNESIPHTIER
Newman PDELIADIKYALKEAFNESIPHTIER
USA300_FPR3757 PDELIADIKYALKEAFNESIPHTIER
**************************