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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001237000
- symbol?: —
- synonym:
- description?: pyrimidine nucleoside transporter NupC
- pyrimidine nucleoside transporter NupC
- nucleoside permease NupC
- nucleoside permease NupC, putative
- NupC/NupG family nucleoside CNT transporter
- putative nucleoside permease NupC
- pyrimidine nucleoside transporter
- CNT family concentrative nucleoside transporter
- Na+ dependent nucleoside transporter
- Na+ dependent nucleoside transporter family protein
- Nucleoside permease
- nucleoside permease nupC (Nucleoside-transport system protein nupC)
- nucleoside transporter permease
- putative nucleoside permease
- putative pyrimidine nucleoside transport protein
- pyrimidine nucleoside transport protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1521165..1522385
- synteny block?: BlockID0007480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0312
08BA02176:
C248_0302
11819-97:
MS7_0303
6850:
RSAU_000259 (nupC1)
71193:
ST398NM01_0326
ECT-R 2:
ECTR2_273
ED133:
SAOV_0266
ED98:
SAAV_0280
HO 5096 0412:
SAEMRSA15_02690
JH1:
SaurJH1_0303
JH9:
SaurJH9_0296
JKD6008:
SAA6008_00289
JKD6159:
SAA6159_00289
LGA251:
SARLGA251_02750
M013:
M013TW_0294
MRSA252:
SAR0310
MSHR1132:
SAMSHR1132_02870
MSSA476:
SAS0290
Mu3:
SAHV_0310
Mu50:
SAV0313
MW2:
MW0290
RF122:
SAB0250
ST398:
SAPIG0326
T0131:
SAT0131_00317
TCH60:
HMPREF0772_10182 (nupC)
TW20:
SATW20_03180
USA300_TCH1516:
USA300HOU_0333
VC40:
SAVC_01315
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNILFAITGIAFALFVAFLFSFDRKKIDFKKTLIMIFIQVLIVLFMMNTTIGLTILTALG
N315 MNILFAITGIAFALFVAFLFSFDRKNIDFKKTLIMIFIQVLIVLFMMNTTIGLTILTALG
NCTC8325 MNILFAITGIAFALFVAFLFSFDRKKIDFKKTLIMIFIQVLIVLFMMNTTIGLTILTALG
Newman MNILFAITGIAFALFVAFLFSFDRKKIDFKKTLIMIFIQVLIVLFMMNTTIGLTILTALG
USA300_FPR3757 MNILFAITGIAFALFVAFLFSFDRKKIDFKKTLIMIFIQVLIVLFMMNTTIGLTILTALG
*************************:**********************************
COL SFFEGLINISKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLIGIFNYIKVLPFIIKYV
N315 SFFEGLINVSKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLIGIFNYIKVLPFIIKYV
NCTC8325 SFFEGLINISKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLIGIFNYIKVLPFIIKYV
Newman SFFEGLINISKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLIGIFNYIKVLPFIIKYV
USA300_FPR3757 SFFEGLINISKAGINFVFGDIQNKNGFTFFLNVLLPLVFISVLIGIFNYIKVLPFIIKYV
********:***************************************************
COL GIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRLSRAKLYTIATSGMSAVSMAM
N315 GIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRLSRAKLYTIATSGMSAVSMAM
NCTC8325 GIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRLSRAKLYTIATSGMSAVSMAM
Newman GIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRLSRAKLYTIATSGMSAVSMAM
USA300_FPR3757 GIAINKITRMGRLESYFAISTAMFGQPEVYLTIKDIIPRLSRAKLYTIATSGMSAVSMAM
************************************************************
COL LGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDTDVEIDNLTKSTETKTLNGKTG
N315 LGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDSDVEIDNLTKSTETKSVNGKTG
NCTC8325 LGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDTDVEIDNLTKSTETKTLNGKTG
Newman LGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDTDVEIDNLTKSTETKTLNGKTG
USA300_FPR3757 LGSYMQMIEPKFVVTAVMLNIFSALIIASVINPYKSDDTDVEIDNLTKSTETKTLNGKTG
**************************************:**************::*****
COL KPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINIMFGSVGLNFKQLIGYVFAP
N315 KPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINIMFGSVGLNFKQLIGYVFAP
NCTC8325 KPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINIMFGSVGLNFKQLIGYVFAP
Newman KPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINIMFGSVGLNFKQLIGYVFAP
USA300_FPR3757 KPKKVAFFQMIGDSAMDGFKIAVVVAVMLLAFISLMEAINIMFGSVGLNFKQLIGYVFAP
************************************************************
COL IAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGDVSARTQGIISVYLVSFANFG
N315 IAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGDVSARTQGIISVYLVSFANFG
NCTC8325 IAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGDVSARTQGIISVYLVSFANFG
Newman IAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGDVSARTQGIISVYLVSFANFG
USA300_FPR3757 IAFLMGIPWSEAVPAGSLMATKLITNEFVAMLDFKNVLGDVSARTQGIISVYLVSFANFG
************************************************************
COL TVGIIVGSIKGISDKQGEKVASFAMRLLLGSTLASIISGSIIGLVL
N315 TVGIIVGSIKGISDKQGEKVSSFAMRLLLGSTLASIISGSIIGLVL
NCTC8325 TVGIIVGSIKGISDKQGEKVASFAMRLLLGSTLASIISGSIIGLVL
Newman TVGIIVGSIKGISDKQGEKVASFAMRLLLGSTLASIISGSIIGLVL
USA300_FPR3757 TVGIIVGSIKGISDKQGEKVASFAMRLLLGSTLASIISGSIIGLVL
********************:*************************