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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001234000
- symbol?: —
- synonym:
- description?: carbohydrate kinase
- carbohydrate kinase
- PfkB family carbohydrate kinase
- PfkB family carbohydrate kinase family, putative
- winged helix-turn-helix transcriptional regulator
- carbohydrate kinase, PfkB family
- carbohydrate kinase-like protein
- marR family protein
- pfkB family carbohydrate kinase family protein
- Pseudouridine kinase
- ribokinase-like domain-containing protein
- sugar kinase in cluster with indigoidine synthase indA , PfkB family of kinases
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1519123..1519899
- synteny block?: BlockID0007450
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0310
08BA02176:
C248_0300
11819-97:
MS7_0301
6850:
RSAU_000257
71193:
ST398NM01_0324
ECT-R 2:
ECTR2_271
ED133:
SAOV_0264
ED98:
SAAV_0278
HO 5096 0412:
SAEMRSA15_02670
JH1:
SaurJH1_0301
JH9:
SaurJH9_0294
JKD6008:
SAA6008_00287
JKD6159:
SAA6159_00287
LGA251:
SARLGA251_02730
M013:
M013TW_0292
MRSA252:
SAR0308
MSHR1132:
SAMSHR1132_02850
MSSA476:
SAS0288
Mu3:
SAHV_0308
Mu50:
SAV0311
MW2:
MW0288
RF122:
SAB0248
ST398:
SAPIG0324
T0131:
SAT0131_00315
TCH60:
HMPREF0772_10184
TW20:
SATW20_03160
USA300_TCH1516:
USA300HOU_0331
VC40:
SAVC_01305
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKEYVMGKAYVLNEDYPI
N315 MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKEYVMGKAYVLNEDYPI
NCTC8325 MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKEYVMGKAYVLNEDYPI
Newman MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKEYVMGKAYVLNEDYPI
USA300_FPR3757 MSDSEKEILKRIKDNPFISQRELAEAIGLSRPSVANIISGLIQKEYVMGKAYVLNEDYPI
************************************************************
COL VCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAENLGRLGETVAFLSASGQDS
N315 VCIGAANVDRKFYVHKDLVAETSNPVTSTRSIGGVARNIAENLGRLGETVAFLSASGQDS
NCTC8325 VCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAENLGRLGETVAFLSASGQDS
Newman VCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAENLGRLGETVAFLSASGQDS
USA300_FPR3757 VCIGAANVDRKFYVHKNLVAETSNPVTSTRSIGGVARNIAENLGRLGETVAFLSASGQDS
****************:*******************************************
COL EWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGLADMEVFDYITPEFLIKR
N315 EWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGLADMEVFDYITPEFLIKR
NCTC8325 EWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGLADMEVFDYITPEFLIKR
Newman EWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGLADMEVFDYITPEFLIKR
USA300_FPR3757 EWEMIKRLSTPFMNLDHVQQFENASTGSYTALISKEGDMTYGLADMEVFDYITPEFLIKR
************************************************************
COL SHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSSPKMKNMPDSLHAIDWIIT
N315 SHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSSPKMKNMPDSLHAIDWIIT
NCTC8325 SHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSSPKMKNMPDSLHAIDWIIT
Newman SHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSSPKMKNMPDSLHAIDWIIT
USA300_FPR3757 SHLLKKAKCIIVDLNLGKEALNFLCAYTTKHQIKLVITTVSSPKMKNMPDSLHAIDWIIT
************************************************************
COL NKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIVTNGVKELIYRSGEEEIIKSVMPSN
N315 NKDETETYLNLKI-----------------------------------------------
NCTC8325 NKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIVTNGVKELIYRSGEEEIIKSVMPSN
Newman NKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIVTNGVKELIYRSGEEEIIKSVMPSN
USA300_FPR3757 NKDETETYLNLKIESTDDLKIAAKRWNDLGVKNVIVTNGVKELIYRSGEEEIIKSVMPSN
*************
COL SVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGMVNAKKTIETKYTVRQNLDQQQLYHDM
N315 ------------------------------------------------------------
NCTC8325 SVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGMVNAKKTIETKYTVRQNLDQQQLYHDM
Newman SVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGMVNAKKTIETKYTVRQNLDQQQLYHDM
USA300_FPR3757 SVKDVTGAGDSFCAAVVYSWLNGMSTEDILIAGMVNAKKTIETKYTVRQNLDQQQLYHDM
COL EDYKNGKFTKVY
N315 ------------
NCTC8325 EDYKNGKFTKVY
Newman EDYKNGKFTKVY
USA300_FPR3757 EDYKNGKFTKVY