Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001224000
- symbol?: brnQ2
- synonym:
- description?: branched-chain amino acid transport system II carrier protein
- branched-chain amino acid transport system II carrier protein
- branched-chain amino acid transporter II carrier protein
- branched-chain amino acid transport system II carrier protein, putative
- Branched-chain amino acid transport system carrier protein
- branched chain amino acid ABC transporter
- branched chain amino acid ABC transporter carrier protein
- branched-chain amino acid transport protein
- LIVCS family branched chain amino acid:cation symporter
- putative amino acid transport system
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1511749..1512954
- synteny block?: BlockID0007350
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0305
08BA02176:
C248_0294
11819-97:
MS7_0296
6850:
RSAU_000252 (brnQ)
71193:
ST398NM01_0319
ECT-R 2:
ECTR2_266 (brnQ)
ED133:
SAOV_0258
ED98:
SAAV_0273 (brnQ2)
HO 5096 0412:
SAEMRSA15_02620
JH1:
SaurJH1_0296
JH9:
SaurJH9_0289
JKD6008:
SAA6008_00282 (brnQ)
JKD6159:
SAA6159_00281 (brnQ)
LGA251:
SARLGA251_02680
M013:
M013TW_0287
MRSA252:
SAR0303
MSHR1132:
SAMSHR1132_02800
MSSA476:
SAS0283
Mu3:
SAHV_0303
Mu50:
SAV0306
MW2:
MW0283
RF122:
SAB0243c
ST398:
SAPIG0319 (brnQ)
T0131:
SAT0131_00308 (spa)
TCH60:
HMPREF0772_10190 (brnQ)
TW20:
SATW20_03110
USA300_TCH1516:
USA300HOU_0325 (brnQ1)
VC40:
SAVC_01280
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFALTGILLPFITVIVVAF
N315 MKKQVIISGLMLFSLFFGAGNLIFPPILGHTAGQNMWIGMLGFALTGILLPFITVIVVAF
NCTC8325 ----------MLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFALTGILLPFITVIVVAF
Newman MKKQVIISGLMLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFALTGILLPFITVIVVAF
USA300_FPR3757 ----------MLFSLFFGAGNLIFPPMLGHTAGQNMWIGMLGFALTGILLPFITVIVVAF
****************:*********************************
COL YDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEIGTRHILPVHNQWTLII
N315 YDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEIGTRHILPVHNQWTLII
NCTC8325 YDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEIGTRHILPVHNQWTLII
Newman YDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEIGTRHILPVHNQWTLII
USA300_FPR3757 YDEGVESVGNRIHPWFGFIFAVVIYMSIGAFYGIPRAANVAYEIGTRHILPVHNQWTLII
************************************************************
COL FAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVIFNPESALSAPKDKYITH
N315 FAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVIFNPESALSAPKDKYITH
NCTC8325 FAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVIFNPESALSAPKDKYITH
Newman FAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVIFNPESALSAPKDKYITH
USA300_FPR3757 FAAIFFAIVYWISLNPSKIVDNLGKLLTPLLLLMVALLSIAVIFNPESALSAPKDKYITH
************************************************************
COL PFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILKYVCFSGLIAAILLGMIYF
N315 PFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILKYVCFSGLIAAILLGMIYF
NCTC8325 PFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILKYVCFSGLIAAILLGMIYF
Newman PFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILKYVCFSGLIAAILLGMIYF
USA300_FPR3757 PFISGSLEGYFTMDLVAALAFSVVIVNGYKFKGLTDRMKILKYVCFSGLIAAILLGMIYF
************************************************************
COL ALAYVGASTAPGNFKDGTDILTYNSLRLFGSFGNLVFGMTVILACLTTCIGLVNACATFT
N315 ALAYVGASTAPGNFKDGTDILTYNSLRVFGSFGNIVFGMTVILACLTTCIGLVNACATFT
NCTC8325 ALAYVGASTAPGNFKDGTDILTYNSLRLFGSFGNLVFGMTVILACLTTCIGLVNACATFT
Newman ALAYVGASTAPGNFKDGTDILTYNSLRLFGSFGNLVFGMTVILACLTTCIGLVNACATFT
USA300_FPR3757 ALAYVGASTAPGNFKDGTDILTYNSLRLFGSFGNLVFGMTVILACLTTCIGLVNACATFT
***************************:******:*************************
COL KKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKIAVPLLTLIYPVSIALVLISFANMFST
N315 KKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKIAVPLLTLIYPVSIALVLISFANMFST
NCTC8325 KKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKIAVPLLTLIYPVSIALVLISFANMFST
Newman KKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKIAVPLLTLIYPVSIALVLISFANMFST
USA300_FPR3757 KKHVPKFSYKIFALIFSIIGFLFTTLGLEMILKIAVPLLTLIYPVSIALVLISFANMFST
************************************************************
COL FRFSWAYRLATVITLIISILQILNSFNLLHGVILKSFMMLPLADIDLAWLVPFMLFAIIG
N315 FRFSWAYRLATVITLIISILQILNSFNLLHGVILKWFMMLPLADIDLAWLVPFMLFAIIG
NCTC8325 FRFSWAYRLATVITLIISILQILNSFNLLHGVILKSFMMLPLADIDLAWLVPFMLFAIIG
Newman FRFSWAYRLATVITLIISILQILNSFNLLHGVILKSFMMLPLADIDLAWLVPFMLFAIIG
USA300_FPR3757 FRFSWAYRLATVITLIISILQILNSFNLLHGVILKSFMMLPLADIDLAWLVPFMLFAIIG
*********************************** ************************
COL FIIDVFIRRPKQATT
N315 FIIDVVIRRPKQATT
NCTC8325 FIIDVFIRRPKQATT
Newman FIIDVFIRRPKQATT
USA300_FPR3757 FIIDVFIRRPKQATT
*****.*********