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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001157000
- symbol?: rbsR
- synonym:
- description?: LacI family transcriptional regulator
- LacI family transcriptional regulator
- putative ribose operon repressor
- ribose operon repressor
- ribose operon repressor, LacI family, putative
- ribose transcriptional repressor RbsR
- bacterial regulatory s, lacI family protein
- LacI family regulatory protein
- regulatory proteins, lacI family protein
- ribose operon repressor, putative
- ribose operon transcriptional regulator
- sugar-binding transcriptional regulator, LacI
- sugar-binding transcriptional regulator LacI
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1428589..1429623
- synteny block?: BlockID0006770
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0271 (rbsR)
08BA02176:
C248_0261
11819-97:
MS7_0261
6850:
RSAU_000218
71193:
ST398NM01_0286
ECT-R 2:
ECTR2_232
ED133:
SAOV_0212
ED98:
SAAV_0239
HO 5096 0412:
SAEMRSA15_02310
JH1:
SaurJH1_0262
JH9:
SaurJH9_0256
JKD6008:
SAA6008_00246 (rbsR)
JKD6159:
SAA6159_00250 (rbsR)
LGA251:
SARLGA251_02360
M013:
M013TW_0252
MRSA252:
SAR0269
MSHR1132:
SAMSHR1132_02380
MSSA476:
SAS0248
Mu3:
SAHV_0270
Mu50:
SAV0271
MW2:
MW0247
RF122:
SAB0211c
ST398:
SAPIG0286
T0131:
SAT0131_00266
TCH60:
HMPREF0772_10229
TW20:
SATW20_02740
USA300_TCH1516:
USA300HOU_0283
VC40:
SAVC_01100
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSERLGYAPNKHAKQLRGS
N315 MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSERLGYAPNKHAKQLRGS
NCTC8325 MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSERLGYAPNKHAKQLRGS
Newman MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSERLGYAPNKHAKQLRGS
USA300_FPR3757 MKKVSIKDVAREAGVSVTTVSHILNHNDSRFSATTIKNVHAVSERLGYAPNKHAKQLRGS
************************************************************
COL KIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDLYDNIKHLIDRGIDGLI
N315 KIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDLYDNIKHLIDRGIDGLI
NCTC8325 KIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDLYDNIKHLIDRGIDGLI
Newman KIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDLYDNIKHLIDRGIDGLI
USA300_FPR3757 KIQTIGVILPSLTNPFFSALMQSIHDHKPSDVDLCFLTSTATDLYDNIKHLIDRGIDGLI
************************************************************
COL IAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQGGQLAAQHLIELGHNHM
N315 IAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQGGQLAAQHLIELGHNHM
NCTC8325 IAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQGGQLAAQHLIELGHNHM
Newman IAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQGGQLAAQHLIELGHNHM
USA300_FPR3757 IAQYISSPDALNNYLKKHHVPYVVLDQNDHQGYTDFVRTNEYQGGQLAAQHLIELGHNHM
************************************************************
COL IIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRGGLTIVDDIMVQSATAIFA
N315 IIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRGGLTIVDDIMVQSATAIFA
NCTC8325 IIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRGGLTIVDDIMVQSATAIFA
Newman IIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRGGLTIVDDIMVQSATAIFA
USA300_FPR3757 IIVAPYDMMANMSTRVAGFVDTLRANQLPEPQIVHTELSKRGGLTIVDDIMVQSATAIFA
************************************************************
COL INDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPPLTTVAQPITDIGKTSLTLL
N315 INDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPPLTTVAQPITDIGKTSLTLL
NCTC8325 INDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPPLTTVAQPITDIGKTSLTLL
Newman INDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPPLTTVAQPITDIGKTSLTLL
USA300_FPR3757 INDELAIGILRGLIEHGISIPKDISLIGYDDIDYAAYVSPPLTTVAQPITDIGKTSLTLL
************************************************************
COL LQRLQHLDKSIDMIELPTTLKIRATTGYHLSN
N315 LQRLQHLDKSIDMIELPTTLKIRATTGYHLSN
NCTC8325 LQRLQHLDKSIDMIELPTTLKIRATTGYHLSN
Newman LQRLQHLDKSIDMIELPTTLKIRATTGYHLSN
USA300_FPR3757 LQRLQHLDKSIDMIELPTTLKIRATTGYHLSN
********************************