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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001009000
- symbol?: —
- synonym:
- description?: DUF4242 domain-containing protein
- DUF4242 domain-containing protein
- alpha-helical coiled-coil protein
- pANL51
- short-chain dehydrogenase
- SrpF
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1275405..1275917
- synteny block?: BlockID0005370
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0172
08BA02176:
C248_0160
11819-97:
MS7_0164 (srpF)
6850:
RSAU_000124
71193:
ST398NM01_0185
ECT-R 2:
ECTR2_134
ED133:
SAOV_0117
ED98:
SAAV_0138
HO 5096 0412:
SAEMRSA15_01360
JH1:
SaurJH1_0161
JH9:
SaurJH9_0156
JKD6008:
SAA6008_00148
JKD6159:
SAA6159_00154
LGA251:
SARLGA251_01440
M013:
M013TW_0160
MRSA252:
SAR0172
MSHR1132:
SAMSHR1132_01440
MSSA476:
SAS0146
Mu3:
SAHV_0170
Mu50:
SAV0171
MW2:
MW0145
RF122:
SAB0111
ST398:
SAPIG0185
T0131:
SAT0131_00161
TCH60:
HMPREF0772_10328
TW20:
SATW20_01810
USA300_TCH1516:
USA300HOU_0184
VC40:
SAVC_00620
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAK
N315 MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAK
NCTC8325 MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAK
Newman MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAK
USA300_FPR3757 MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAK
************************************************************
COL QFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVH
N315 QFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVH
NCTC8325 QFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVH
Newman QFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVH
USA300_FPR3757 QFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVH
************************************************************
COL YEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
N315 YEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
NCTC8325 YEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
Newman YEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
USA300_FPR3757 YEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
**************************************************