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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000951000
- symbol?: deoB
- synonym:
- description?: phosphopentomutase
- phosphopentomutase
- phosphopentomutase, putative
- putative phosphopentomutase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1211423..1212616
- synteny block?: BlockID0004870
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0140 (drm)
08BA02176:
C248_0128 (deoB)
11819-97:
MS7_0130 (deoB)
6850:
RSAU_000093 (deoB)
71193:
ST398NM01_0153
ECT-R 2:
ECTR2_95 (deoB)
ED133:
SAOV_0086 (deoB)
ED98:
SAAV_0107 (deoB)
HO 5096 0412:
SAEMRSA15_01050 (drm)
JH1:
SaurJH1_0130
JH9:
SaurJH9_0125
JKD6008:
SAA6008_00117 (drm)
JKD6159:
SAA6159_00122 (drm)
LGA251:
SARLGA251_01130 (drm)
M013:
M013TW_0129
MRSA252:
SAR0141 (drm)
MSHR1132:
SAMSHR1132_01150
MSSA476:
SAS0113
Mu3:
SAHV_0138 (drm)
Mu50:
SAV0139 (drm)
MW2:
MW0113 (drm)
RF122:
SAB0078 (drm)
ST398:
SAPIG0153 (deoB)
T0131:
SAT0131_00128
TCH60:
HMPREF0772_10359 (deoB)
TW20:
SATW20_01500 (drm)
USA300_TCH1516:
USA300HOU_0151 (deoB1)
VC40:
SAVC_00440 (drm)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKL
N315 MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKL
NCTC8325 MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKL
Newman MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKL
USA300_FPR3757 MTRPFNRVHLIVMDSVGIGEAPDAADFKDEGSHTLRHTLEGFDQTLPNLEKLGLGNIDKL
************************************************************
COL PVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMT
N315 PVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMT
NCTC8325 PVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMT
Newman PVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMT
USA300_FPR3757 PVVNAVEQPEAYYTKLSEASVGKDTMTGHWEIMGLNIMQPFKVYPNGFPEELIQQIEEMT
************************************************************
COL GRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKV
N315 GRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKV
NCTC8325 GRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKV
Newman GRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKV
USA300_FPR3757 GRKVVANKPASGTQIIDEWGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYDICEKV
************************************************************
COL RELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGK
N315 RELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGK
NCTC8325 RELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGK
Newman RELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGK
USA300_FPR3757 RELTKDPKYLIGRIIARPYVGEPGNFTRTSNRHDYALKPFGKTVLDHLKDGGYDVIAIGK
************************************************************
COL INDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQ
N315 INDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQ
NCTC8325 INDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQ
Newman INDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQ
USA300_FPR3757 INDIYDGEGVTEAVRTKSNMDGMDQLMKIVKKDFTGISFLNLVDFDALYGHRRDKPGYAQ
************************************************************
COL AIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALE
N315 AIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALE
NCTC8325 AIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALE
Newman AIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALE
USA300_FPR3757 AIKDFDDRLPELFSNLKEDDLVIITADHGNDPTAPGTDHTREYIPVIMYSPKFKGGHALE
************************************************************
COL SDTTFSSIGATIADNFNVTLPEFGKSYLKELK
N315 SDTTFSSIGATIADNFNVTLPEFGKSYLKELK
NCTC8325 SDTTFSSIGATIADNFNVTLPEFGKSYLKELK
Newman SDTTFSSIGATIADNFNVTLPEFGKSYLKELK
USA300_FPR3757 SDTTFSSIGATIADNFNVTLPEFGKSYLKELK
********************************