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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000950000
- symbol?: deoC1
- synonym:
- description?: 2-deoxyribose-5-phosphate aldolase
- 2-deoxyribose-5-phosphate aldolase
- deoxyribose-phosphate aldolase
- deoxyribose-phosphate aldolase, putative
- deoxyribose-phosphate aldolase 1
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1210748..1211410
- synteny block?: BlockID0004860
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0139 (dra)
08BA02176:
C248_0127 (deoC1)
11819-97:
MS7_0129
6850:
RSAU_000092 (deoC1)
71193:
ST398NM01_0152
ECT-R 2:
ECTR2_94 (deoC)
ED133:
SAOV_0085
ED98:
SAAV_0106 (deoC1)
HO 5096 0412:
SAEMRSA15_01040 (deoC1)
JH1:
SaurJH1_0129
JH9:
SaurJH9_0124
JKD6008:
SAA6008_00116 (dra)
JKD6159:
SAA6159_00121 (dra)
LGA251:
SARLGA251_01120 (deoC1)
M013:
M013TW_0128
MRSA252:
SAR0140 (deoC1)
MSHR1132:
SAMSHR1132_01140
MSSA476:
SAS0112
Mu3:
SAHV_0137 (dra)
Mu50:
SAV0138 (dra)
MW2:
MW0112 (dra)
RF122:
SAB0077 (deoC1)
ST398:
SAPIG0152 (deoC)
T0131:
SAT0131_00127
TCH60:
HMPREF0772_10360 (deoC)
TW20:
SATW20_01490 (deoC1)
USA300_TCH1516:
USA300HOU_0150 (deoC1)
VC40:
SAVC_00435
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTV
N315 MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTV
NCTC8325 MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTV
Newman MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTV
USA300_FPR3757 MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTV
************************************************************
COL IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
N315 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
NCTC8325 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
Newman IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
USA300_FPR3757 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
************************************************************
COL VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
N315 VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
NCTC8325 VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
Newman VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
USA300_FPR3757 VKVIIETVLLDHDEIVKASELTKTAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
***********************:************************************
COL ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
N315 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
NCTC8325 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
Newman ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
USA300_FPR3757 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
****************************************