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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000920000
- symbol?: sbnF
- synonym:
- description?: IucA/IucC family siderophore biosynthesis protein
- IucA/IucC family siderophore biosynthesis protein
- IucC family siderophore biosynthesis protein
- 3-(L-alanin-3-ylcarbamoyl)-2-[(2- aminoethylcarbamoyl)methyl]-2-hydroxypropanoate synthase SbnF
- putative siderophore biosynthesis protein, IucC family
- siderophore biosynthesis IucC family protein
- IucA/IucC family protein
- siderophore biosynthesis protein
- putative siderophore biosynthesis protein
- siderophore biosynthesis protein, IucC family
- Siderophore staphylobactin biosynthesis protein SbnF
- Siderophore synthase
- siderophore synthetase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1189514..1191376
- synteny block?: BlockID0004570
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0122 (sbnF)
08BA02176:
C248_0109
11819-97:
MS7_0113
6850:
RSAU_000075
71193:
ST398NM01_0133
ECT-R 2:
ECTR2_77
ED133:
SAOV_0068
ED98:
SAAV_0089
HO 5096 0412:
SAEMRSA15_00870
JH1:
SaurJH1_0112
JH9:
SaurJH9_0108
JKD6008:
SAA6008_00099
JKD6159:
SAA6159_00104
LGA251:
SARLGA251_00960 (sbnF)
M013:
M013TW_0111
MRSA252:
SAR0124
MSHR1132:
SAMSHR1132_00970
MSSA476:
SAS0095
Mu3:
SAHV_0120
Mu50:
SAV0121
MW2:
MW0094
RF122:
SAB0060
ST398:
SAPIG0133
T0131:
SAT0131_00107
TCH60:
HMPREF0772_10376 (sbnF)
TW20:
SATW20_01330 (sbnF)
USA300_TCH1516:
USA300HOU_0132
VC40:
SAVC_00345
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------------------------MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDG
N315 ------------------------MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDG
NCTC8325 MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDG
Newman MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDG
USA300_FPR3757 MIVVQTLFIHIYQIQFVITRRYRIVNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDG
:***********************************
COL VGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREVVFTFPKN
N315 VGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKN
NCTC8325 VGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREVVFTFPKN
Newman VGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREVVFTFPKN
USA300_FPR3757 VGHFTIEGHDSEYRFTAEKTHSFDRIRITSPIERVVGDEADTTTDYTQLLREVVFTFPKN
****************************************************.*******
COL DEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFT
N315 DEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFT
NCTC8325 DEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFT
Newman DEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFT
USA300_FPR3757 DEKLEQFIVELLQTELKDTQSMQYRESNPPATPETFNDYEFYAMEGHQYHPSYKSRLGFT
************************************************************
COL LSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEAS
N315 LSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEAS
NCTC8325 LSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEAS
Newman LSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEAS
USA300_FPR3757 LSDNLKFGPDFVPNVKLQWLAIDKDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEAS
************************************************************
COL GKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTK
N315 GKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTK
NCTC8325 GKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTK
Newman GKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTK
USA300_FPR3757 GKHVNDVEMIPVHPWQFEHVIQVDLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTTK
************************************************************
COL YYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSY
N315 YYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSY
NCTC8325 YYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSY
Newman YYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSY
USA300_FPR3757 YYLKVPISITNTSTKRVLAPHTIENAAQITDWLKQIQQQDMYLKDELKTVFLGEVLGQSY
************************************************************
COL LNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGVPFIENWIKQYG
N315 LNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGLPFIEKWIKQYG
NCTC8325 LNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGVPFIENWIKQYG
Newman LNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGVPFIENWIKQYG
USA300_FPR3757 LNTQLSPYKQTQVYGALGVIWRENIYHMLIDEEDAIPFNALYASDKDGVPFIENWIKQYG
************************************************:****:******
COL SEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKRE
N315 SEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKRE
NCTC8325 SEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKRE
Newman SEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKRE
USA300_FPR3757 SEAWTKQFLAVAIRPMIHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKRE
************************************************************
COL HLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYG
N315 HLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYG
NCTC8325 HLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYG
Newman HLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYG
USA300_FPR3757 HLSEAASHLTLKPMPEAHKKVNSNSFIETDDERLVRDFLHDAFFFINIAEIILFIEKQYG
************************************************************
COL IDEELQWQWVKGIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN
N315 IDEQRQWQWVKDIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN
NCTC8325 IDEELQWQWVKGIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN
Newman IDEELQWQWVKGIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN
USA300_FPR3757 IDEELQWQWVKGIIEAYQEAFPELNNYQHFDLFEPTIQVEKLTTRRLLSDSELRIHHVTN
***: ******.************************************************
COL PLGVGGINDATTISET
N315 PLGVGGINDATTISET
NCTC8325 PLGVGGINDATTISET
Newman PLGVGGINDATTISET
USA300_FPR3757 PLGVGGINDATTISET
****************