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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
⊟Summary[edit | edit source]
- pan ID?: SAUPAN000662000
- symbol?: —
- synonym:
- description?: phi77 ORF003-like protein, phage terminase, large subunit
- phi77 ORF003-like protein, phage terminase, large subunit
- terminase
- terminase large subunit
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 773885..2175662
- synteny block?: BlockID0003120
- occurrence?: in 6% of 34 strains
terL : serogroup F terminase large subunit [1]
Prophage terminase complexes assist in transferring the prophage genome into phage capsids. The large terminase subunit is an ATP-driven motor unit that translocates viral DNA provided to it by the small subunit into empty capsids. The serogroup F large terminase subunit is assisted by the hnh nuclease which cleaves genome concatemers at cos sites, ensuring each capsid receives a single prophage genome.
⊟Orthologs[edit | edit source]
COL:
—
N315:
—
NCTC8325:
—
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_1971
VC40:
—
⊟Genome Viewer[edit | edit source]
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Michael Feiss, Venigalla B Rao
The bacteriophage DNA packaging machine.
Adv Exp Med Biol: 2012, 726;489-509
[PubMed:22297528] [WorldCat.org] [DOI] (P p)Smriti Kala, Nichole Cumby, Paul D Sadowski, Batool Zafar Hyder, Voula Kanelis, Alan R Davidson, Karen L Maxwell
HNH proteins are a widespread component of phage DNA packaging machines.
Proc Natl Acad Sci U S A: 2014, 111(16);6022-7
[PubMed:24711378] [WorldCat.org] [DOI] (I p)