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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS07035 [old locus tag: SACOL1382 ]
- pan locus tag?: SAUPAN003722000
- symbol: SACOL_RS07035
- pan gene symbol?: sbcC
- synonym:
- product: nuclease SbcCD subunit C
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS07035 [old locus tag: SACOL1382 ]
- symbol: SACOL_RS07035
- product: nuclease SbcCD subunit C
- replicon: chromosome
- strand: +
- coordinates: 1384730..1387759
- length: 3030
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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3001ATGAAACCATTACATTTAAAGTTGAATAATTTCGGCCCCTTTTTAAAAGAAGAAATTGAT
TTTTCTAAAATTGATAATAATGAATTGTTTTTAATAAGTGGTAAGACTGGATCGGGTAAA
ACAATGATTTTTGATGCAATGACTTATGCCTTGTTTGGTAAAGCATCAACTGAACAAAGA
GAAGAAAATGATTTGAGAAGTCATTTCGCTGATGGTAAACAGCCGATGTCAGTAACATTT
GAATTTCAATTAAATCATCGAATTTATAAAGTGCATAGACAAGGCCCTTATATCAAAGAA
GGTAATACAACAAAAACGAACGCTAAATTTGATGTATTTGAGATGGTGGATGGCAAGTAT
GAAATTAGAGAAAGTAAAGTAATTTCAGGTACCCAATTCATTATTGAATTATTAGGAGTA
AATGCAGATCAATTCCGACAATTGTTTATTTTGCCTCAAGGTGAATTCAAACGCTTTTTA
ATATCAAACAGTCGTGAAAAGCAAGGGATATTAAGAACACTGTTTGACAGTGAAAAATTT
GAAGCTATACGAGAAATATTAAAAGAAGAAGTAAAAAAAGAAAAAGCTCAAATCGAGAAT
AGATATCAACAAATTGACCTTTTATGGCAAGAAATTGAATCATTTGATGATGACAATATA
AAAGGCTTATTAGAGGTTGCCACTCAACAGATAGACAAATTGATTGAAAATATACCACTT
TTACAAGCTAGGTCGAAAGAAATACTAGCATCTGTAAATGAAAGTAAAGAAACTGCTATT
AAAGAATTTGAAATAATAGAAAAGAAAACATTAGAAAATAATATATTAAAAGATAATATT
AATCAACTCAACAAAAATAAAATTGATTTCGTTCAATTGAAAGAACAACAACCTGAAATA
GAGGGAATTGAAGCTAAGTTAAAGTTGTTACAAGATATTACAAACCTATTGAATTATATT
GAAAATAGAGAAAAAATTGAAACTAAAATTGCTAATAGCAAAAAAGATATTTCTAAAACC
AATAATAAAATATTGAATCTTGATTGTGATAAGCGAAACATAGACAAAGAGAAAAAAATG
TTAGAAGAAAATGGAGATTTAATTGAAAGTAAAATCTCTTTTATTGATAAAACTAGAGTA
TTATTTAACGATATTAATAAGTATCAACAAAGTTATCTCAATATTGAACGCTTGAGAACT
GAGGGTGAACAATTAGGTGATGAATTAAATGATCTAATTAAAGGTTTAGAAACGGTCGAA
GATTCAATAGGTAATAACCAAAGTGATTACGAGAAAATTATCGAACTAAATAATACGATA
ACGAACATAAATAATGAAATTAATATAATTAAAGAAAATGAAAAAGCTAAAGCTGAATTA
GATAAACTATTAGGTAGTAAGCAAGAGTTAGAGAATCAAATTAATGAAGAAACATCTATA
TTGAAGAATCTCGAAATAAAATTAGATCGCTACGATAAAACAAAATTGGACTTAAATGAT
AAAGAAAGCTTTATAAGTGAAATTAAATCTGCTGTAAATATTGGAGATCAATGTCCGATA
TGTGGTAATGAAATTCAGGATTTAGGGCATCATATTGATTTTGACAGTATTGCTAAACGT
CAAAATGAAATTAAAGAAATTGAAGCAAATATCCACGCTATAAAATCGAATATTGCTGTG
CATAATTCTGAAATTAAATTTGTTAATGAAAAAATATCGAATATTAATATTAAAACGCAA
AGTGATTTTTCACTTGAAGTATTGAATAAGCGTCTGCTAGAAAATGAAAATGCATTGAAT
AATCAAAGAGATCTTAATAAATTTATAGAACAAATGAAAGAAGAAAAAGATAATCTAACG
TTGCAAATTCATAATAAACAATTGCGTCTAAATAAAAATGAATCTGAGTTGAAATTATGT
CGAGATCTCATCACTGAATTTGAAACACTCTCGAAATATAATAATATCACTAATTTTGAG
GTGGATTATAAGAAGTATGTTCAAGATGTGAATCAGCATCAAGAACTCTCAAAGGAGATT
GAAGATAAGTTAATGCAATTGTCTCAAAGAAAGTTAATTGAGCAAAATAATCTAAATCAT
TATGAAAATCAACTAGAAACTTACAATAATGACTTAGAATTGAATGAACAGTCTATTGAA
ATGGAAATGTCGAGGCTGAATTTAACTGATGACAATGATATAGATGAAATAATAGCCTGG
AGGGGCGAGCAAGAGGAATTAGAGCAGAAAAGGGATACTTATAAAAAACGTTATCATGAA
TTTGAAATGGAAATAGCTAGGTTAGAATCATTAACTAAGGATAAAGAGTTATTGGACTCT
GATAAATTAAAAGATGAATATGAGCTAAAAAAAGGAAAGATGAATACACTGATAGATGAA
TACTCTGCTGTTCATTATCAATGTCAAAATAATATTAATAAAACACAATCTATAGTTTCG
CATATTAATTACTTAAATCAAGAATTAAAGGATCAACAAGAAATATTTCAATTGGCTGAA
ATTGTCAGTGGTAAGAATAACAAAAATCTTACATTGGAAAACTTTGTCTTAATTTACTAT
TTAGATCAAATTATTGCTCAAGCAAATCTGAGATTAGCAACAATGTCAGATAATCGATAC
CAACTAATTAGGCGAGAAGCGGTTTCTCATGGTCTTAGTGGCCTAGAAATTGATGTATTT
GATTTGCATTCAAATAAGTCTAGACATATTAGCTCGTTATCAGGTGGAGAAACTTTCCAA
TCGTCGCTTGCATTAGCTTTAGGGTTAAGCGAAATTGTACAGCAGCAATCAGGAGGTATT
TCACTAGAATCAATATTTATTGATGAAGGATTCGGTACATTAGATCAAGAAACGCTTGAA
ACAGCGTTAGACACTTTATTAAATCTTAAATCAACTGGTAGAATGGTTGGGATTATTTCA
CATGTGAGCGAATTGAAAAATAGAATACCTTTAGTTTTAGAAGTGAAATCAGATCAATAT
CAGAGTTCAACAAGATTCAAAAGAAATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS07035 [old locus tag: SACOL1382 ]
- symbol: SACOL_RS07035
- description: nuclease SbcCD subunit C
- length: 1009
- theoretical pI: 4.80299
- theoretical MW: 117317
- GRAVY: -0.700297
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKPLHLKLNNFGPFLKEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYALFGKASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIKEGNTTKTNAKFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFILPQGEFKRFLISNSREKQGILRTLFDSEKFEAIREILKEEVKKEKAQIENRYQQIDLLWQEIESFDDDNIKGLLEVATQQIDKLIENIPLLQARSKEILASVNESKETAIKEFEIIEKKTLENNILKDNINQLNKNKIDFVQLKEQQPEIEGIEAKLKLLQDITNLLNYIENREKIETKIANSKKDISKTNNKILNLDCDKRNIDKEKKMLEENGDLIESKISFIDKTRVLFNDINKYQQSYLNIERLRTEGEQLGDELNDLIKGLETVEDSIGNNQSDYEKIIELNNTITNINNEINIIKENEKAKAELDKLLGSKQELENQINEETSILKNLEIKLDRYDKTKLDLNDKESFISEIKSAVNIGDQCPICGNEIQDLGHHIDFDSIAKRQNEIKEIEANIHAIKSNIAVHNSEIKFVNEKISNINIKTQSDFSLEVLNKRLLENENALNNQRDLNKFIEQMKEEKDNLTLQIHNKQLRLNKNESELKLCRDLITEFETLSKYNNITNFEVDYKKYVQDVNQHQELSKEIEDKLMQLSQRKLIEQNNLNHYENQLETYNNDLELNEQSIEMEMSRLNLTDDNDIDEIIAWRGEQEELEQKRDTYKKRYHEFEMEIARLESLTKDKELLDSDKLKDEYELKKGKMNTLIDEYSAVHYQCQNNINKTQSIVSHINYLNQELKDQQEIFQLAEIVSGKNNKNLTLENFVLIYYLDQIIAQANLRLATMSDNRYQLIRREAVSHGLSGLEIDVFDLHSNKSRHISSLSGGETFQSSLALALGLSEIVQQQSGGISLESIFIDEGFGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVKSDQYQSSTRFKRN
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: LexA see SACOL1382
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available