From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06670 [old locus tag: SACOL1307 ]
  • pan locus tag?: SAUPAN003591000
  • symbol: SACOL_RS06670
  • pan gene symbol?: —
  • synonym:
  • product: metallophosphoesterase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS06670 [old locus tag: SACOL1307 ]
  • symbol: SACOL_RS06670
  • product: metallophosphoesterase
  • replicon: chromosome
  • strand: +
  • coordinates: 1323639..1324436
  • length: 798
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (1323639..1324436) NCBI
  • BioCyc: SACOL_RS06670 BioCyc
  • MicrobesOnline: see SACOL1307

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAGAATAATGTTTATAGGGGATATCGTAGGTAAAATTGGACGAGACGCAATTGAAACG
    TACATACCTCAACTGAAGCAAAAGTATAAACCAACAGTTACAATTGTAAATGCTGAAAAT
    GCAGCACATGGTAAAGGTTTGACTGAAAAAATATATAAACAATTACTAAGAAATGGTGTA
    GATTTCATGACTATGGGTAATCACACATATGGTCAACGTGAAATTTATGATTTTATAGAT
    GAAGCAAAACGACTAGTAAGACCAGCGAATTTTCCGGATGAAGCGCCGGGAATTGGTATG
    AGATTTATACAAATTAATGATATTAAACTTGCAGTTATTAATCTGCAAGGAAGAGCGTTT
    ATGCCAGATATTGATGATCCTTTTAAAAAGGCAGATCAATTAGTCAAGGAAGCACAAGAA
    CAAACTCCGTTTATATTTGTTGATTTTCATGCAGAAACAACTTCTGAAAAGTATGCAATG
    GGATGGCATTTAGATGGTAGAGCTAGCGCTGTTGTTGGAACGCATACACACATTCAAACA
    GCAGATGAACGTATTTTACCAAAGGGGACAGGGTATATAACGGATGTTGGTATGACAGGT
    TTTTATGATGGCATTTTAGGAATAAATAAAACAGAGGTAATTGAGCGTTTTATCACTAGT
    TTGCCACAAAGACATGTTGTTCCAAATGAAGGTAGAAGTGTATTATCTGGTGTTGTTATT
    GATTTAGACAAAGAAGGTAAAACAAAGCACATCGAACGTATATTGATAAATGATGACCAT
    CCATTTTCAACATTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    798

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS06670 [old locus tag: SACOL1307 ]
  • symbol: SACOL_RS06670
  • description: metallophosphoesterase
  • length: 265
  • theoretical pI: 6.61158
  • theoretical MW: 29875
  • GRAVY: -0.308302

⊟Function[edit | edit source]

  • TIGRFAM:
    Unknown function Enzymes of unknown specificity metallophosphoesterase, MG_246/BB_0505 family (TIGR00282; HMM-score: 351.5)
  • TheSEED: see SACOL1307
  • PFAM:
    Calcineurin (CL0163) YmdB; YmdB-like protein (PF13277; HMM-score: 359.2)
    and 1 more
    Metallophos; Calcineurin-like phosphoesterase (PF00149; HMM-score: 32.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.010764
    • TAT(Tat/SPI): 0.00021
    • LIPO(Sec/SPII): 0.00217
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MRIMFIGDIVGKIGRDAIETYIPQLKQKYKPTVTIVNAENAAHGKGLTEKIYKQLLRNGVDFMTMGNHTYGQREIYDFIDEAKRLVRPANFPDEAPGIGMRFIQINDIKLAVINLQGRAFMPDIDDPFKKADQLVKEAQEQTPFIFVDFHAETTSEKYAMGWHLDGRASAVVGTHTHIQTADERILPKGTGYITDVGMTGFYDGILGINKTEVIERFITSLPQRHVVPNEGRSVLSGVVIDLDKEGKTKHIERILINDDHPFSTF

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL1307
  • protein localization: see SACOL1307
  • quantitative data / protein copy number per cell: see SACOL1307
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://fungenwikiserver.biologie.uni-greifswald.de/aureowiki/index.php?title=SACOL_RS06670&oldid=85715"