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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06110 [old locus tag: SACOL1193 ]
  • pan locus tag?: SAUPAN003450000
  • symbol: SACOL_RS06110
  • pan gene symbol?: ftsL
  • synonym:
  • product: cell division protein FtsL

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS06110 [old locus tag: SACOL1193 ]
  • symbol: SACOL_RS06110
  • product: cell division protein FtsL
  • replicon: chromosome
  • strand: +
  • coordinates: 1197258..1197659
  • length: 402
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (1197258..1197659) NCBI
  • BioCyc: SACOL_RS06110 BioCyc
  • MicrobesOnline: see SACOL1193

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGGCTGTAGAAAAAGTGTACCAACCATATGACGAACAAGTTTATAATAGTATACCGAAG
    CAACAACCACAAACTAAGCCCGAAAAGAAGACTGTTTCGAGAAAAGTGGTTGTACAATTA
    ACTAAATTTGAAAAAGTTTTATACATAACTTTGATTACTGTAATTGCTATGTTAAGTATT
    TATATGCTATCTTTAAAAATGGATGCGTATGATACGCGAGGAAAGATTGCAGATTTAGAT
    TATAAAATAGATAAACAATCAAGTGAAAACAGTGCTTTACAATCTGAAATCAAAAAGAAT
    TCTTCTTATGAACGCATATACGAAAAGGCTAAGAAACAGGGGATGAGCCTTGAGAACGAT
    AATGTAAAGGTAGTGCGTAGTAATGGCGAAGCAAAAAATTAA
    60
    120
    180
    240
    300
    360
    402

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS06110 [old locus tag: SACOL1193 ]
  • symbol: SACOL_RS06110
  • description: cell division protein FtsL
  • length: 133
  • theoretical pI: 9.83728
  • theoretical MW: 15333.6
  • GRAVY: -0.681955

⊟Function[edit | edit source]

  • TIGRFAM:
    Cellular processes Cellular processes Cell division cell division protein FtsL (TIGR02209; HMM-score: 83.6)
  • TheSEED: see SACOL1193
  • PFAM:
    FtsL (CL0225) DivIC; Septum formation initiator (PF04977; HMM-score: 54.1)
    and 4 more
    FtsL_2; Bacteriodetes cell division protein (FtsL-like) (PF19579; HMM-score: 20.2)
    no clan defined Tmemb_9; TMEM9 (PF05434; HMM-score: 17.9)
    GCV_T_C (CL0740) GTP-eEF1A_C; GTP-eEF1A C-terminal domain-like (PF22594; HMM-score: 14.2)
    no clan defined TSC22; TSC-22/dip/bun family (PF01166; HMM-score: 13.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helix: 1
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9875
    • Cell wall & surface Score: 0.0007
    • Extracellular Score: 0.0118
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.00366
    • TAT(Tat/SPI): 0.000138
    • LIPO(Sec/SPII): 0.003477
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MAVEKVYQPYDEQVYNSIPKQQPQTKPEKKTVSRKVVVQLTKFEKVLYITLITVIAMLSIYMLSLKMDAYDTRGKIADLDYKIDKQSSENSALQSEIKKNSSYERIYEKAKKQGMSLENDNVKVVRSNGEAKN

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: see SACOL1193
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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