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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS01720 [old locus tag: SACOL0342 ]
- pan locus tag?: SAUPAN001445000
- symbol: SACOL_RS01720
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS01720 [old locus tag: SACOL0342 ]
- symbol: SACOL_RS01720
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 365551..365907
- length: 357
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301ATGCCGATGAGCAAAACACAAGCATTAGAAATTATTAAAAAAGTTAGGTACGTATACAAC
ATCGATTTTGATAAACCAAAGTTAGAAATGTGGATTGATGTATTAAGTCAAAACGGAGAT
TATCAACCAACTGCAAAAGCGGTAGATGGATATATCAACAGTAACAACCCGTATCCGCCT
AACTTACCAGCAATCATGCGTAAGGCACCTAAAAAAGTATCTATCGAGCCGGTAGACAAC
GAAACTGCTACACACCAATGGAAAATGCAGAATGACCCCGAATATGTCAAACAAAGAAAA
ATAGCGCTAGATAACTTCATGAATAAGTTGGCAGAATTTGGGGGCGATAACGAATGA60
120
180
240
300
357
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS01720 [old locus tag: SACOL0342 ]
- symbol: SACOL_RS01720
- description: hypothetical protein
- length: 118
- theoretical pI: 7.50223
- theoretical MW: 13632.5
- GRAVY: -0.794068
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SACOL0342
- PFAM: no clan defined Inhibitor_G39P; Loader and inhibitor of phage G40P (PF11417; HMM-score: 16.9)and 2 moreNAAA-beta; beta subunit of N-acylethanolamine-hydrolyzing acid amidase (PF15508; HMM-score: 13.1)PX; PX domain (PF00787; HMM-score: 12.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.010231
- TAT(Tat/SPI): 0.000344
- LIPO(Sec/SPII): 0.000592
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MPMSKTQALEIIKKVRYVYNIDFDKPKLEMWIDVLSQNGDYQPTAKAVDGYINSNNPYPPNLPAIMRKAPKKVSIEPVDNETATHQWKMQNDPEYVKQRKIALDNFMNKLAEFGGDNE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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