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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS00895 [old locus tag: SACOL0176 ]
  • pan locus tag?: SAUPAN001033000
  • symbol: SACOL_RS00895
  • pan gene symbol?: mupG
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS00895 [old locus tag: SACOL0176 ]
  • symbol: SACOL_RS00895
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 203222..204262
  • length: 1041
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (203222..204262) NCBI
  • BioCyc: SACOL_RS00895 BioCyc
  • MicrobesOnline: see SACOL0176

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    GTGTATTTAGGACAACCTTTAGATGAAGCGTATATTAAGCGAATGATTAAACAAGGTTAC
    CAAATGATTTTTACATCTGTACAAATACCAGAAGAAGATGACGAGACAAAATATCATTAT
    TTCACAAAACTACTCAATTTATTAAAACATGAACAAGTGACTTACCTCATAGATGCTAAT
    CCATCTATTTTAACACCATCTTTTTATGACCATCTTCGACAATATGATGCACAATTTATG
    ATTCGTATCGATCATAGTACATCAATTGAGGCAATCGAAGCGATAATGGCACAGGGTTTA
    AAGTGCTGTTTGAATGCAAGTATTATTTCCCGGGAATTGTTAACAAGCTTACATCAACAA
    TTGAATGATTTTACATTACTTTCATTTTGTCATAACTATTATCCAAGACCAGATACGGGA
    TTATCTGTTGACTTGGTCAATAAGAAAAATGAACTCATTTATCAATTTAATCCAAAGGCA
    CAAATATATGGTTTTATTGTAGGGAGTGATTTGCGAGGTCCTTTGCATAAAGGCTTGCCA
    ACAATTGAAGCAACGAGACATAGTCATCCTGTCGTTGCAGCTAAATTATTACAAGAAACT
    GGTGTATCTGAAGTGTTAGTTGGAGACTCATTGATTGAAATGAGGCAGGCAAAACAACTT
    ATAGATTTTTGCAAGCATAGGCATTTCACGTTATGTATTGAAGAAGTGTTTGATACGACA
    GTGACTTACCTTTTCGATATGTGTCATAAAGTACGCCCGGATAATCCGGAAAATGTCATT
    CGTTCGGAAACGTCAAGACAAATATGTCCACATTCGATTCAACCACAGTTTACGACGCAA
    CGACGCATTGGTTCAGTAACCGTTGATAATTTGAATAACGGACGTTATCAAGGCGAAATG
    CAAATTGTGAGACAAACGCTTAGTGCACATGACAATGTGAATGTTGTTGCACAAATTATT
    AAAGAAGACTTACCACTGTTAAGTTGTATCGAGCCGAATGATACATTTGATTTTCAAAAA
    ACTAGGGAGTGTAAGAAGTGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1041

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS00895 [old locus tag: SACOL0176 ]
  • symbol: SACOL_RS00895
  • description: hypothetical protein
  • length: 346
  • theoretical pI: 6.50411
  • theoretical MW: 39868.4
  • GRAVY: -0.322832

⊟Function[edit | edit source]

  • TIGRFAM:
    quinoprotein dehydrogenase-associated SoxYZ-like carrier (TIGR04557; HMM-score: 12.1)
  • TheSEED: see SACOL0176
  • PFAM:
    TIM_barrel (CL0036) MupG_N; 6-phospho-N-acetylmuramidase, N-terminal (PF19200; HMM-score: 138.9)
    and 1 more
    Cyclophil-like (CL0475) MupG_C; 6-phospho-N-acetylmuramidase, C-terminal (PF05913; HMM-score: 106.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9973
    • Cytoplasmic Membrane Score: 0.0014
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0013
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.001422
    • TAT(Tat/SPI): 0.000152
    • LIPO(Sec/SPII): 0.000348
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MYLGQPLDEAYIKRMIKQGYQMIFTSVQIPEEDDETKYHYFTKLLNLLKHEQVTYLIDANPSILTPSFYDHLRQYDAQFMIRIDHSTSIEAIEAIMAQGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSDLRGPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRSETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL0176
  • protein localization: see SACOL0176
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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