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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL0403 [new locus tag: SACOL_RS02030 ]
- pan locus tag?: SAUPAN001866000
- symbol: SACOL0403
- pan gene symbol?: —
- synonym:
- product: BglG family transcriptional antiterminator
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL0403 [new locus tag: SACOL_RS02030 ]
- symbol: SACOL0403
- product: BglG family transcriptional antiterminator
- replicon: chromosome
- strand: -
- coordinates: 408681..410636
- length: 1956
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3236524 NCBI
- RefSeq: YP_185295 NCBI
- BioCyc: see SACOL_RS02030
- MicrobesOnline: 911874 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1921TTGTTAAGTTATAGACAAATCGAAATTTTGTATCTTTTAATTCATGAGCAAACGTTTATT
CCAATCAATACCATTGCTAATCAACTTGGTGTATCACCTCGTACCATTCAATATGATATA
GCATATATTGAGCAATATGCTGAAACTTATCATTACCAAGTCAGCCGTAATAAAGCTGCA
GGCATCAAAGTAACAACAGCTCACGCGACACTATTAAATGAATTAGAGCACAATCTAACA
AATCAAATTCATTTTTCAAAAGATGAACGACTCACACATATCGCTTTAAAGTTATTCGAA
ACAACCGATCCTGTTTCAACAAAGCAACTTGCGCAAGATGTTAATGTTTCGCGTCGGACA
ATTGCAGATGATATTAAAATGATTCAAGCCCAACTAGATCAATACCATTTAAAGTTAAAT
TATGTCCACAATAAAGGATTCAATATTATTGGTGAGGAAGATCATTATCGTAAAGCGTAT
GCACACTTTATACATCAATATATGAAACAAGCTGCACCTTTTATAGAGGCGGATATCTTT
AATTCAGAATCAATCGCATTGGTTCGCCGTGCCATTATTAAGACATTAAATAGTGAAAAT
TATCATTTAGTTCAGTCGGCTATCGATGGCTTAATCTATCATATACTCATTGCCATTCAG
CGTTTAAATGAAAATTTTTCGTTCGATATACCTATCAATGAAATTGATAAATGGCGACAT
ACTAATCAGTATGCTATTGCTTCAAAAATGATAGAAAACTTAGAACGCAGTTGTAATGTC
ACATTTCCAGAGTCTGAAATTATCTTTATCACGTTACATTTACTAGGCTCTAAAATGACT
GAACATACAGCATCTTCAATTACCTTTGAATACCATGATTTATCGCAAAATATACATGAA
TTGATCACTTGTGTTAGCCAAGAATTAGGCATTGATATGTCAAAAGACAACAAGTTACAT
ACCAGTCTGATCACACATATCAAACCAGCTATACATCGTATTAAATACGATATGCTACAA
CCTAATCCTTTGAGGCAAGAAGTTATGCGTCGCTATCCTCAAATCATTGAAGCCGTTAGC
AAGCATATTAGTCCAATTGAACAAGATGCTGCTATTCGCTTCAACGAAGATGAATTAACA
TACATTACAATTCACTTCGCATCAAGTATAGAGCGTGTTGCAACACATAAACAATCAATG
ATTAAGGTTGTCTTACTATGTGGTTCTGGTATAGGCACGTCACAACTTTTAAAATCAAAA
CTAAATCACCTGTATCCTGAGTTTCACATTTGGGATGCCTATTCCATTTATCAATTGGAA
GAAAGTCGATTATTGCAAGATAACATTGATTATGTCATTTCAACAGTACCTTGTGAAATA
TCAGCTGTACCAGTTATTCATGTCGATCCATTTATCAATCAACAATCTCGTCAAAAATTG
AATCAAATTATCAATGACTCAAGAGAACAACGAGTCATGAAAATGGCAACTGATGGCAAG
TCACTCGCAGATTTATTGCCTGAACATCGCATCATTATAAATAAACAACCATTATCAATT
GAATCCGCAATTGCAGTGGCTGTGCAACCTTTAATCAATGATGGCATTGTCTATTCAAAT
TATACAGCTGCAATTTTAAAACAATTTGAACAATTCGGGTCATATATGGTCATTAGTCCA
CATATTGCACTTATTCACGCTGGTACTGATTATGTACAGAATGGTGTAGGTTTCGCACTA
ACATATTTCACTGAAGGGATTATCTTTGGTAGTAAAGCTAACGATCCCGTTCACCTTGTA
ATTACATTAGCAACGGACCACCCCAATGCACATTTAAAGGCATTGGGACAGTTAAGCGAA
TGCTTAAGCAACGACTTATATCGACAAGATTTCTTAGATGGGAATATTTTTAAAATTAAA
CAACACATTGCTTTAACTATGACAAAGGAGGCTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL0403 [new locus tag: SACOL_RS02030 ]
- symbol: SACOL0403
- description: BglG family transcriptional antiterminator
- length: 651
- theoretical pI: 6.60796
- theoretical MW: 74472.7
- GRAVY: -0.156221
⊟Function[edit | edit source]
- ⊞TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 27.5)Signal transduction PTS PTS system, fructose subfamily, IIA component (TIGR00848; EC 2.7.1.69; HMM-score: 27.5)and 1 more
- TheSEED :
- PTS system, mannitol/fructose-specific IIA component (EC 2.7.1.69)
- Putative transcriptional antiterminator, BglG family
- ⊞PFAM: PRD (CL0166) PRD; PRD domain (PF00874; HMM-score: 124.5)and 25 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MLSYRQIEILYLLIHEQTFIPINTIANQLGVSPRTIQYDIAYIEQYAETYHYQVSRNKAAGIKVTTAHATLLNELEHNLTNQIHFSKDERLTHIALKLFETTDPVSTKQLAQDVNVSRRTIADDIKMIQAQLDQYHLKLNYVHNKGFNIIGEEDHYRKAYAHFIHQYMKQAAPFIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPINEIDKWRHTNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHTASSITFEYHDLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIKYDMLQPNPLRQEVMRRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFASSIERVATHKQSMIKVVLLCGSGIGTSQLLKSKLNHLYPEFHIWDAYSIYQLEESRLLQDNIDYVISTVPCEISAVPVIHVDPFINQQSRQKLNQIINDSREQRVMKMATDGKSLADLLPEHRIIINKQPLSIESAIAVAVQPLINDGIVYSNYTAAILKQFEQFGSYMVISPHIALIHAGTDYVQNGVGFALTYFTEGIIFGSKANDPVHLVITLATDHPNAHLKALGQLSECLSNDLYRQDFLDGNIFKIKQHIALTMTKEA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ Andreas Otto, Jan Maarten van Dijl, Michael Hecker, Dörte Becher
The Staphylococcus aureus proteome.
Int J Med Microbiol: 2014, 304(2);110-20
[PubMed:24439828] [WorldCat.org] [DOI] (I p)