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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1687 [new locus tag: SA_RS09685 ]
  • pan locus tag?: SAUPAN004853000
  • symbol: SA1687
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA1687 [new locus tag: SA_RS09685 ]
  • symbol: SA1687
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1934824..1935660
  • length: 837
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGCTAGATAATATTATTTTATATTTTAAAAACTTACCGCATACTAAAAGGTATGTAACA
    GAACGTTTAAAACAAAGTTGGAAAAGTTTTCTAATCGTATTAGCTGCATGTTTAATACTT
    ATTATTGCAAGTGAAACGCTATTTTCCTTTAGTCATTTGACCGATGTTAAAGAGGTGCGA
    TGGTTATTTAGAATTATTGCATTGATTGTTTTTGCGGTATTGATGTTCACAATTTATATC
    TCTTATCATCATTATATGAATGACTTTTTAGTGACTAAGTTATTTAATATTTCCGCAGCG
    ACGCCAGTAGTTATTATGTCTATTTTAAGTTTTATTATGCTAGTCATTTTGACGATGATT
    AGTGCATTGGTTAAACCAGTAAACTTCGAAACATCATATATAGCGCTATTCTATTTTATT
    GTGATGGCAACTATTTTTGTAGGATTAATATCCGTTACTTTTGGTCTTATTCGACTGTTA
    ACTGAAAAAATAAATATCATATTTTATGGGGTTTGTGTATTGTGTATCTTATTGTTACCA
    ATTATTTTCATACCAAATCCAAATCATGTATTTATCAATCACATCCTAATGCTGAATCCA
    ATGTATTACATTGTTAATGGTATAGCACAATCTATCATATTTGGTATATCAAGTATGGAA
    AACATTCCATATCATTTTTACTTTATTTTATTCTTATGTTTAATAGCTGCAGTAAATTTC
    GTATTAGCAAGGTATACGACACACGCAATTTATAATAAAACATCTAAAGTGACACAAACT
    GATAATCAACAAGATGTTTCAAATGATAGTACAGACGAGGCGGATACTTCTTCATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    837

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA1687 [new locus tag: SA_RS09685 ]
  • symbol: SA1687
  • description: hypothetical protein
  • length: 278
  • theoretical pI: 7.9856
  • theoretical MW: 31906.9
  • GRAVY: 0.885971

⊟Function[edit | edit source]

  • TIGRFAM:
    TIGR03943 family protein (TIGR03943; HMM-score: 3.9)
  • TheSEED  :
    • Teichoic acid translocation permease protein TagG
    Cell Wall and Capsule Gram-Positive cell wall components Teichoic and lipoteichoic acids biosynthesis  Teichoic acid translocation permease protein TagG
  • PFAM:
    no clan defined DUF2615; Protein of unknown function (DUF2615) (PF11027; HMM-score: 8.4)
    ABC-2 (CL0181) ABC2_membrane; ABC-2 type transporter (PF01061; HMM-score: 7.2)
    no clan defined DUF4131; Domain of unknown function (DUF4131) (PF13567; HMM-score: 7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: 0
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.013735
    • TAT(Tat/SPI): 0.000404
    • LIPO(Sec/SPII): 0.076395
  • predicted transmembrane helices (TMHMM): 7

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MLDNIILYFKNLPHTKRYVTERLKQSWKSFLIVLAACLILIIASETLFSFSHLTDVKEVRWLFRIIALIVFAVLMFTIYISYHHYMNDFLVTKLFNISAATPVVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLLTEKINIIFYGVCVLCILLLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISSMENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSNDSTDEADTSS

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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