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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1530 [new locus tag: SA_RS08610 ]
  • pan locus tag?: SAUPAN004359000
  • symbol: SA1530
  • pan gene symbol?: pepQ
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA1530 [new locus tag: SA_RS08610 ]
  • symbol: SA1530
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1748483..1749559
  • length: 1077
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGTTGAGGAGTGTTTATGAAATGACAAAAATATCAAAAATAATAGACGAACTGAACAAT
    CAACAAGCTGATGCAGCATGGATTACAACACCGTTGAATGTATATTATTTTACTGGATAC
    CGTAGCGAACCCCATGAAAGATTATTTGCATTATTGATTAAGAAAGATGGTAAACAAGTA
    CTATTTTGTCCAAAAATGGAAGTCGAAGAAGTCAAAGCATCACCTTTCACAGGTGAAATC
    GTTGGATATTTAGACACTGAAAATCCTTTTTCACTTTATCCTCAAACAATCAATAAATTA
    CTAATTGAAAGCGAGCACTTAACAGTAGCACGCCAAAAACAATTAATCTCTGGTTTCAAT
    GTCAATTCATTCGGAGATGTTGATTTAACAATCAAACAATTAAGAAATATTAAATCCGAA
    GATGAAATTAGCAAAATACGTAAAGCTGCTGAGTTAGCAGATAAGTGTATCGAAATAGGT
    GTTTCTTATTTAAAAGAAGGTGTGACTGAACGTGAAGTAGTCAACCATATTGAGCAAACT
    ATCAAACAATATGGCGTCAATGAAATGAGTTTTGATACGATGGTTTTATTTGGAGATCAT
    GCCGCATCACCTCATGGCACACCAGGAGATCGCAGATTAAAAAGCAATGAATATGTACTA
    TTTGATTTAGGTGTAATTTATGAGCATTATTGTAGCGATATGACACGTACCATTAAATTT
    GGTGAACCTAGCAAAGAAGCACAAGAAATTTATAATATTGTATTAGAAGCAGAAACATCT
    GCAATCCAAGCAATTAAACCTGGAATACCTTTAAAAGATATCGATCATATCGCTAGAAAT
    ATTATTTCAGAAAAAGGTTATGGTGAATATTTCCCTCATCGCTTAGGTCATGGTTTAGGA
    TTACAAGAACATGAATATCAAGATGTTTCAAGTACTAATTCTAATTTGTTAGAAGCTGGC
    ATGGTTATTACAATCGAACCAGGTATTTATGTACCAGGTGTTGCAGGTGTAAGAATTGAA
    GATGACATACTTGTCACTAATGAAGGATATGAAGTATTAACACATTACGAAAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1077

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA1530 [new locus tag: SA_RS08610 ]
  • symbol: SA1530
  • description: hypothetical protein
  • length: 358
  • theoretical pI: 4.80061
  • theoretical MW: 40485.7
  • GRAVY: -0.308939

⊟Function[edit | edit source]

  • reaction:
    EC 3.4.-.-?  ExPASy
  • TIGRFAM:
    Genetic information processing Protein fate Protein modification and repair methionine aminopeptidase, type I (TIGR00500; EC 3.4.11.18; HMM-score: 88.8)
    and 2 more
    ectoine utilization protein EutD (TIGR02993; EC 3.-.-.-; HMM-score: 67.7)
    Genetic information processing Protein fate Protein modification and repair methionine aminopeptidase, type II (TIGR00501; EC 3.4.11.18; HMM-score: 45.9)
  • TheSEED  :
    • Xaa-Pro dipeptidase (EC 3.4.13.9)
  • PFAM:
    no clan defined Peptidase_M24; Metallopeptidase family M24 (PF00557; HMM-score: 220.7)
    and 1 more
    AMP_N-like (CL0356) Creatinase_N; Creatinase/Prolidase N-terminal domain (PF01321; HMM-score: 78.8)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors: Mn2+
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005527
    • TAT(Tat/SPI): 0.000165
    • LIPO(Sec/SPII): 0.000302
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MLRSVYEMTKISKIIDELNNQQADAAWITTPLNVYYFTGYRSEPHERLFALLIKKDGKQVLFCPKMEVEEVKASPFTGEIVGYLDTENPFSLYPQTINKLLIESEHLTVARQKQLISGFNVNSFGDVDLTIKQLRNIKSEDEISKIRKAAELADKCIEIGVSYLKEGVTEREVVNHIEQTIKQYGVNEMSFDTMVLFGDHAASPHGTPGDRRLKSNEYVLFDLGVIYEHYCSDMTRTIKFGEPSKEAQEIYNIVLEAETSAIQAIKPGIPLKDIDHIARNIISEKGYGEYFPHRLGHGLGLQEHEYQDVSSTNSNLLEAGMVITIEPGIYVPGVAGVRIEDDILVTNEGYEVLTHYEK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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