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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0619 [new locus tag: SA_RS03550 ]
  • pan locus tag?: SAUPAN002544000
  • symbol: SA0619
  • pan gene symbol?: pitA
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA0619 [new locus tag: SA_RS03550 ]
  • symbol: SA0619
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 714092..715099
  • length: 1008
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGTCATATATAATCATCGTCACTATAGCTGTAGTTATTTTCTCGCTGATATTTGACTTT
    ATCAATGGATTCCATGATACAGCCAATGCAGTAGCTACTGCTGTATCTACTAGAGCGTTA
    ACGCCTAAAACGGCAATTTTAATGGCAGCAGTGATGAACTTTATAGGTGCTTTAACATTT
    ACGGGCGTTGCAGGCACCATTACTAAAGACATTGTCGATCCATTTAAATTGGAAAATGGA
    TTAGTTGTTGTGTTAGCTGCAATACTTGCGGCTATTATTTGGAATTTAGCTACTTGGTTT
    TACGGAATTCCAAGTTCGTCTTCACATGCACTTATAGGTTCAATTGCGGGTGCAGCAATC
    GCATCTGAAGGCTCATTTGGAGTGTTACATTACCAAGGTTTCACAAAAATTATTATTGTA
    TTAATCGTTTCACCGATAATCGCATTTTGTGTTGGTTTCTTGATGTATTCAATTTTTAAA
    GTTATCTTTAAAAATGCAAATTTAACAAGAGCGAATCGTAACTTTAGATTTTTCCAAATT
    TTCACGGCAGCGTTACAATCATTCTCTCACGGTACGAATGATGCGCAAAAATCAATGGGT
    ATTATTACGTTGGCATTGATTGTCGCTAATGTACAGAATGATGGCAGTGTTGAACCACAG
    TTATGGGTAAAATTTGCCTGTGCGACAGCAATGGGGCTTGGTACTGCAATTGGTGGCTGG
    AAAATTATCAAAACTGTAGGTGGTAATATTATGAAAATACGTCCAGCAAATGGTGCTGCG
    GCCGATTTATCATCTGCATTAACAATTTTTGTTGCATCATCGCTACATTTCCCATTATCA
    ACAACTCACGTTGTGTCATCATCAATCTTAGGTGTTGGTGCTTCTAACCGAGCTAAAGGT
    GTAAAATGGAGCACTGCGCAACGAATGATCATTACATGGGTGATTACATTACCTATTTCA
    GCATTGTTAGCAGGTTTACTATTCTATATACTTAACTTATTTTTCTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1008

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA0619 [new locus tag: SA_RS03550 ]
  • symbol: SA0619
  • description: hypothetical protein
  • length: 335
  • theoretical pI: 10.3947
  • theoretical MW: 35587.8
  • GRAVY: 0.891045

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • Probable low-affinity inorganic phosphate transporter
    Phosphorus Metabolism Phosphorus Metabolism - no subcategory Phosphate metabolism  Probable low-affinity inorganic phosphate transporter
  • PFAM:
    no clan defined PHO4; Phosphate transporter family (PF01384; HMM-score: 305.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: 0
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.160057
    • TAT(Tat/SPI): 0.001101
    • LIPO(Sec/SPII): 0.003457
  • predicted transmembrane helices (TMHMM): 7

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSYIIIVTIAVVIFSLIFDFINGFHDTANAVATAVSTRALTPKTAILMAAVMNFIGALTFTGVAGTITKDIVDPFKLENGLVVVLAAILAAIIWNLATWFYGIPSSSSHALIGSIAGAAIASEGSFGVLHYQGFTKIIIVLIVSPIIAFCVGFLMYSIFKVIFKNANLTRANRNFRFFQIFTAALQSFSHGTNDAQKSMGIITLALIVANVQNDGSVEPQLWVKFACATAMGLGTAIGGWKIIKTVGGNIMKIRPANGAAADLSSALTIFVASSLHFPLSTTHVVSSSILGVGASNRAKGVKWSTAQRMIITWVITLPISALLAGLLFYILNLFF

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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