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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS10190 [old locus tag: NWMN_1783 ]
- pan locus tag?: SAUPAN001717000
- symbol: NWMN_RS10190
- pan gene symbol?: —
- synonym:
- product: tail protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS10190 [old locus tag: NWMN_1783 ]
- symbol: NWMN_RS10190
- product: tail protein
- replicon: chromosome
- strand: -
- coordinates: 1998116..1998697
- length: 582
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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541ATGGCGAATATGAAAAATAGTAATGACCGTATTATTTTGTTTAGAAAAGCTGGCGAAAAA
GTAGATGCTACTAAAATGCTTTTTTTAACTGAATACGGCTTATCACATGAAGCTGATACA
GATACAGAGGATACGATGGATGGGTCTTATAACACTGGTGGTTCAGTTGAATCAACAATG
TCTGGTACTGCTAAAATGTTTTATGGTGACGATTTTGCAGATGAAATTGAAGATGCAGTT
GTAGATCGCGTATTGTATGAGGCTTGGGAAGTTGAAAGTAGAATACCAGGCAAAAATGGA
GATGCTACTAAATTTAAAGCGAAATATTTCCAAGGTTTCCACAATAAATTTGAATTAAAA
GCAGAAGCTAACGGTATTGATGAATATGAATATGAATATGGAGTGAATGGTCGTTTCCAA
CGTGGATTTGCAACACTACCTGAGGCTGTAACAAAGAAACTTAAGGCGACTGGATACAGA
TTCCATGACACTACAAAAGCAGATGCGTTAACTGGCGAAGATTTAACAGCAATTCCACAA
CCTAAGGTAGATTCATCAACGGTTACACCAGGAGAGGTATAA60
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582
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS10190 [old locus tag: NWMN_1783 ]
- symbol: NWMN_RS10190
- description: tail protein
- length: 193
- theoretical pI: 4.47504
- theoretical MW: 21451.6
- GRAVY: -0.652332
⊟Function[edit | edit source]
- TIGRFAM: Mobile and extrachromosomal element functions Prophage functions phage major tail protein, TP901-1 family (TIGR02126; HMM-score: 52.7)
- TheSEED: data available for NCTC8325
- PFAM: Phage_TTPs (CL0569) Phage_tail_2; Phage tail tube protein (PF06199; HMM-score: 124.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.013981
- TAT(Tat/SPI): 0.001119
- LIPO(Sec/SPII): 0.002122
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MANMKNSNDRIILFRKAGEKVDATKMLFLTEYGLSHEADTDTEDTMDGSYNTGGSVESTMSGTAKMFYGDDFADEIEDAVVDRVLYEAWEVESRIPGKNGDATKFKAKYFQGFHNKFELKAEANGIDEYEYEYGVNGRFQRGFATLPEAVTKKLKATGYRFHDTTKADALTGEDLTAIPQPKVDSSTVTPGEV
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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