Jump to navigation
Jump to search
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS10160 [old locus tag: NWMN_1777 ]
- pan locus tag?: SAUPAN001713000
- symbol: NWMN_RS10160
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS10160 [old locus tag: NWMN_1777 ]
- symbol: NWMN_RS10160
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1989036..1990946
- length: 1911
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861ATGGATAACAAATTAATTACAGACTTAAGTAGAGTTTTCGATTACAGATATGTAGATGAA
AATGAGTATAATTTCAAGCTTATTTCAGACATGCTGACTGATTTTAATTTCTCTCTTGAA
TACCATAGAAATAAAGAGGTATTTGCACATAATGGAGAGCAAATAAAGTATGAGCATTTA
AATGTCACAAGTAGCGTCTCTGATTTTTTAACGTATCTAAACGGCCGTTTCAGCAATATG
GTACTAGGTCATAACGGCGACGGTATCAACGAAGTAAAAGACGCGCGTGTTGATAATACT
GGTTATGATCATAAGACATTGCAAGATCGTTTGTATCATGATTATTCAACACTAGATGCT
TTCACTAAAAAGGTTGAGAAAGCTGTAGATGAAAACTATAAAGAATATCGAGCTACAGAA
TACCGATTCGAACCAAAAGAGCAAGAACCGGAATTCATCACAGATTTATCGCCATATACT
AACGCAGTAATGCAATCATTTTGGGTAGACCCTAGAACGAAAATTATTTATATGACGCAA
GCTCGTCCAGGTAATCATTACATGTTATCTAGATTGAAGCCCAACGGACAATTTATTGAT
AGATTGCTTGTTAAAAACGGCGGTCACGGTACACACAATGCGTATAGATACATTGATGGA
GAATTATGGATTTATTCAGCTGTATTGGACAGTAACAAAAACAACAAGTTTGTACGTTTC
CAATATAGAACTGGAGAAATAACTTATGGTAATGAAATGCAAGATGTCATGCCGAATATA
TTTAACGACAGATATACGTCAGCGATTTATAATCCTATAGAAAATTTAATGATTTTCAGA
CGTGAATATAAAGCTTCTGAAAGACAAGCTAAGAATTCATTGAATTTCATTGAAGTAAGA
AGTGCTGACGATATTGATAAAGGTATAGACAAAGTATTGTATCAAATGGATATACCTATG
GAATACACTTCAGATACACAACCTATGCAAGGTATCACTTATGATGCAGGTATCTTATAT
TGGTATACAGGTGATTCGAATACAGCCAACCCTAACTACTTACAAGGTTTCGATATAAAA
ACAAAAGAATTGTTATTTAAACGACGTATCGATATTGGCGGTGTGAATAATAACTTTAAA
GGAGACTTCCAAGAAGCTGAGGGTCTAGATATGTATTACGATCTAGAAACAGGACGTAAA
GCACTTTTAATAGGGGTAACTATTGGACCTGGTAATAACAGACATCACTCAATTTATTCT
ATCGGCCAAAGAGGTGTTAACCAATTCTTAAAAAACATTGCACCTCAAGTATCGATGACT
GATTCAGGTGGACGTGTTAAACCGTTACCAATACAGAACCCAGCATATCTAAGTGATATT
ACGGAAGTTGGTCATTACTATATCTATACGCAAGACACACAAAATGCATTAGATTTCCCG
TTACCGAAAGCGTTTAGAGATGCAGGGTGGTTCTTGGATGTACTGCCTGGACACTATAAT
GGTGCTCTAAGACAAGTACTTACCAGAAACAGCACAGGTAGAAATATGCTTAAATTCGAA
CGTGTCATTGACATTTTCAATAAGAAAAACAACGGAGCATGGAATTTCTGTCCGCAAAAC
GCCGGTTATTGGGAACATATCCCTAAGAGTATTACAAAATTATCAGATTTAAAAATCGTT
GGTTTAGATTTCTATATCACTACTGAAGAATCAAAACGATTTACTGATTTTCCTAAAGAC
TTTAAAGGTATTGCAGGTTGGATATTAGAAATAAAATCGAATACACCAGGTAACACAACA
CAAGTATTAAGACGTAATAACTTCCCGTCTGCGCATCAATTTTTAGTTAGAAACTTTGGT
ACTGGTGGCGTTGGTAAATGGAGTTTATTCGAGGGAAAGGTGGTTGAATAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1260
1320
1380
1440
1500
1560
1620
1680
1740
1800
1860
1911
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS10160 [old locus tag: NWMN_1777 ]
- symbol: NWMN_RS10160
- description: hypothetical protein
- length: 636
- theoretical pI: 6.69048
- theoretical MW: 73630.1
- GRAVY: -0.628302
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.003413
- TAT(Tat/SPI): 0.000097
- LIPO(Sec/SPII): 0.000235
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MDNKLITDLSRVFDYRYVDENEYNFKLISDMLTDFNFSLEYHRNKEVFAHNGEQIKYEHLNVTSSVSDFLTYLNGRFSNMVLGHNGDGINEVKDARVDNTGYDHKTLQDRLYHDYSTLDAFTKKVEKAVDENYKEYRATEYRFEPKEQEPEFITDLSPYTNAVMQSFWVDPRTKIIYMTQARPGNHYMLSRLKPNGQFIDRLLVKNGGHGTHNAYRYIDGELWIYSAVLDSNKNNKFVRFQYRTGEITYGNEMQDVMPNIFNDRYTSAIYNPIENLMIFRREYKASERQAKNSLNFIEVRSADDIDKGIDKVLYQMDIPMEYTSDTQPMQGITYDAGILYWYTGDSNTANPNYLQGFDIKTKELLFKRRIDIGGVNNNFKGDFQEAEGLDMYYDLETGRKALLIGVTIGPGNNRHHSIYSIGQRGVNQFLKNIAPQVSMTDSGGRVKPLPIQNPAYLSDITEVGHYYIYTQDTQNALDFPLPKAFRDAGWFLDVLPGHYNGALRQVLTRNSTGRNMLKFERVIDIFNKKNNGAWNFCPQNAGYWEHIPKSITKLSDLKIVGLDFYITTEESKRFTDFPKDFKGIAGWILEIKSNTPGNTTQVLRRNNFPSAHQFLVRNFGTGGVGKWSLFEGKVVE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.