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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_1731 [new locus tag: NWMN_RS15410 ]
- pan locus tag?: SAUPAN004765000
- symbol: NWMN_1731
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_1731 [new locus tag: NWMN_RS15410 ]
- symbol: NWMN_1731
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1930581..1930724
- length: 144
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 5331021 NCBI
- RefSeq: YP_001332765 NCBI
- BioCyc:
- MicrobesOnline: 3707291 MicrobesOnline
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
61
121TTGGAAACGAAATTTCTAAGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTA
ACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGA
TATTTCTTGTCATCTCTTTTTTAA60
120
144
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_1731 [new locus tag: NWMN_RS15410 ]
- symbol: NWMN_1731
- description: hypothetical protein
- length: 47
- theoretical pI: 10.3252
- theoretical MW: 5713.81
- GRAVY: 0.353191
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM: P-loop_NTPase (CL0023) NBD_SMAX1; SMAX1 nucleotide binding domain (PF23569; HMM-score: 12.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.631
- Cytoplasmic Membrane Score: 0.1608
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.2081
- LocateP: N-terminally anchored (No CS)
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.5
- Signal peptide possibility: 0
- N-terminally Anchored Score: 4
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.099518
- TAT(Tat/SPI): 0.009894
- LIPO(Sec/SPII): 0.182625
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
- METKFLSSRLRSRSQLFLLVTAYLFFKIKCQINEMTLEIRYFLSSLF
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]