From AureoWiki
Jump to navigation Jump to search

NCBI: 06-JUL-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_1370 [new locus tag: NWMN_RS07715 ]
  • pan locus tag?: SAUPAN003919000
  • symbol: NWMN_1370
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_1370 [new locus tag: NWMN_RS07715 ]
  • symbol: NWMN_1370
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1537034..1537396
  • length: 363
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    TTGATATATACTATATTAGAAATGCAATATAAGGAGAACGTAGAAATGAAATCAATGGTA
    GAAATGCAACGTGAAGTTGATGAATATATTGGACAATTTAAAACAGGATATTTTTCACCA
    TTAGCTAACTTAGCTAGATTGACTGAAGAAGTGGGCGAACTTGCACGTGAAATAAATCAT
    ACCTATGGTGAAAAAAAGAAGAAAGATTCAGAGGAAGCAAATACGATTAAAGCAGAATTA
    GGTGATAATTTATTTGTGTTGTTATGTTTAGCGAATTCAATGGGAATAGATATGACAGAG
    AGCTTTAATGAAACAATGGAAAAGTTTAATACAAGAGATAAAAATCGATTCGAAAGAAAG
    TGA
    60
    120
    180
    240
    300
    360
    363

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_1370 [new locus tag: NWMN_RS07715 ]
  • symbol: NWMN_1370
  • description: hypothetical protein
  • length: 120
  • theoretical pI: 4.62535
  • theoretical MW: 14080.9
  • GRAVY: -0.703333

⊟Function[edit | edit source]

  • TIGRFAM:
    Unknown function General MazG family protein (TIGR00444; HMM-score: 24.9)
  • TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
  • PFAM:
    MazG (CL0231) MazG; MazG nucleotide pyrophosphohydrolase domain (PF03819; HMM-score: 77.2)
    and 3 more
    dUTPase_2; dUTPase (PF08761; HMM-score: 23)
    PRA-PH; Phosphoribosyl-ATP pyrophosphohydrolase (PF01503; HMM-score: 17.6)
    MazG-like; MazG-like family (PF12643; HMM-score: 14.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002932
    • TAT(Tat/SPI): 0.000295
    • LIPO(Sec/SPII): 0.000484
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MIYTILEMQYKENVEMKSMVEMQREVDEYIGQFKTGYFSPLANLARLTEEVGELAREINHTYGEKKKKDSEEANTIKAELGDNLFVLLCLANSMGIDMTESFNETMEKFNTRDKNRFERK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://fungenwikiserver.biologie.uni-greifswald.de/aureowiki/index.php?title=NWMN_1370&oldid=63469"