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NCBI: 06-JUL-2013

⊟Summary[edit | edit source]

organism: Staphylococcus aureus Newman

locus tag: NWMN_0986 [new locus tag: NWMN_RS05530 ]

pan locus tag^?: SAUPAN003350000

symbol: NWMN_0986

pan gene symbol^?: —

synonym:
product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: NWMN_0986 [new locus tag: NWMN_RS05530 ]
symbol: NWMN_0986
product: hypothetical protein
replicon: chromosome
strand: -
coordinates: 1095158..1095547
length: 390
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Gene ID: 5330592 NCBI
RefSeq: YP_001332020 NCBI
BioCyc:
MicrobesOnline: 3706537 MicrobesOnline

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

1
61
121
181
241
301
361
ATGAAACAAACATTTATTACACTTGGTGAAGGTCTAACAGATTTGTTCGAATTCATGACG
ATGATTGAATATAACCATCAACGTATTGATAAAATTATCTATTTTCATTCACCACAAGCT
GAAAATAAAAAGTCATCTGTAGCAATCATTATGAACCCTACAACTGGCAATCATTTCCAA
GCATTTTATATCATGATAAACGCTATTAAATATCCATATCCAGATTCAAATAAAAAGTTT
CAAATGATAAATGATTGTGCTGAAAAATTCGACATACCAATTTTAGGTATCGATGTACAG
CCCCCTCAAGCATTTCATGATTTATCGTTATATTATAATTATTTAATTAGTGTGTTAAGG
CTCCAAAAATGGATACCAGAACTTCAATAA
60
120
180
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300
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390

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: NWMN_0986 [new locus tag: NWMN_RS05530 ]
symbol: NWMN_0986
description: hypothetical protein
length: 129
theoretical pI: 6.50912
theoretical MW: 15185.5
GRAVY: -0.186822

⊟Function[edit | edit source]

TIGRFAM:
Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs glutamate--cysteine ligase (TIGR01436; EC 6.3.2.2; HMM-score: 10.9)
TheSEED :
- Uncharacterized protein BC3931
⊞PFAM:
no clan defined DUF7147; Domain of unknown function (DUF7147) (PF23648; HMM-score: 149.9)
and 1 more
DUF6208; Family of unknown function (DUF6208) (PF19713; HMM-score: 13.4)

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

⊞
PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
⊞
DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.6153
- Cytoplasmic Membrane Score: 0.2685
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.1161
⊞
LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
⊞
SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.005074
- TAT(Tat/SPI): 0.000174
- LIPO(Sec/SPII): 0.000605
predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

GI: 151221198 NCBI
RefSeq: YP_001332020 NCBI
UniProt: A0A0H3K7F6 UniProt

⊟Protein sequence[edit | edit source]

MKQTFITLGEGLTDLFEFMTMIEYNHQRIDKIIYFHSPQAENKKSSVAIIMNPTTGNHFQAFYIMINAIKYPYPDSNKKFQMINDCAEKFDIPILGIDVQPPQAFHDLSLYYNYLISVLRLQKWIPELQ

⊟Experimental data[edit | edit source]

experimentally validated: data available for NCTC8325
protein localization:
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

MicrobesOnline: no polycistronic organisation predicted

⊟Regulation[edit | edit source]

regulator:

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊞Biological Material[edit | edit source]

⊞Other Information[edit | edit source]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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