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FunGene: 08-OCT-2024

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: JSNZ_000338
  • pan locus tag?: SAUPAN001985000
  • symbol: JSNZ_000338
  • pan gene symbol?: tcyP
  • synonym:
  • product: L-cystine transporter

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: JSNZ_000338
  • symbol: JSNZ_000338
  • product: L-cystine transporter
  • replicon: chromosome
  • strand: -
  • coordinates: 370632..372020
  • length: 1389
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq:
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGAATGCTTTTCTTACACTGATTAATATTATTGTATTGGTGATTTTCATCGTAATATTG
    CACATGATGGCTCGCAAACATATATCTTTTGCGAAACGTGTGTTTACAGCTTTAGGTATC
    GGCATTGTATTTGGCGTGTTATTACATCTTGTCTATGGAACACATTCGAATGTTATTACA
    TCAACAAGTGACTGGTTCAACATTGTCTGACAAGGTTACGTTGCATTGTTGCAAATGATT
    GTGATGCCTTTAATTTTCATTTCTATTGTCGCTGCATTCACTAAAATTCAAATCGGAGAA
    AAGTTTGCTAAAATTGGTAGTCTCATTTTTATCTTTTTAATTGGCACTGTCACCATTGCT
    GCAATTGTTGGTGTTGTTTATGCCTTGGTGTTTGGTTTAGATGCATCAACAATTAATCTT
    GGTAACGCTGAACAAGCACGTGGAAGCGAAATTGCTAAACAAGCGAAAGATTTAACAGCA
    CATACGTTACCACAACAAATTTTGGAATTATTGCCTAAAAATCCATTCTTAGATTTCACT
    GGACAACGTGCAACTTCCACGATTGCTGTCGTGATATTTGCTTCGTTTATAGGATTTGCT
    TATTTACGCGTAGCACGCAAACAACCTGATCATGGTGAATTGCTTAAGCGTGCGATTGAC
    GCTATCTATTCACTAGTAATGGCGATTGTGACGTTCGTCTTACGTTTAACGCCATACGGT
    GTATTAGCAATTATGGCCAACACATTATCGACAAGTGACTTTGGCGCCATTTGGACTTTA
    GGAAAATTCTTAATCGCATCGTACGCTGCATTAATTACGATGTATATCATTCACTTAATT
    ATTTTAAGCCTGTTAGGTATTAGCCCAATTCGCTATGTTAAAAAGACTTTGGAAGTATTA
    ATCTTTGCATTCACATCACGCTCAAGCGCGGGTGCCTTACCATTGAATGTACAAACACAA
    ACAAGACGTCTAGGCGTGCCAGAAGGTATTGCCAATTTTGCTGCGACATTTGGATTGTCG
    ATTGGACAAAATGGTTGTGCAGGCATTTACCCTGCCATGCTTGCAATTATGGTCGCACCC
    GTCGCTAATGTAGAAATTGATTTACAATTTATTGTAACGTTAATCGCTGTCGTGATTATT
    AGTTCATTCGGCGTTGCTGGCGTCGGTGGCGGGGCTACATTTGCATCCATATTGGTGTTG
    TCAACGTTAAACTTGCCAGTCGCTTTAGCCGGCGTGCTCATCTCCGTTGAACCATTGATT
    GACATGGGTAGAACAGCATTAAACGTGAACGATTCAATGCTAGCTGGTACAGGTACCGCC
    AAGTTAACTAAACATTGGGATAAAGATACTTTCGAATCAAATGATAATGCTGCATTAACT
    TCACACTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1389

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: JSNZ_000338
  • symbol: JSNZ_000338
  • description: L-cystine transporter
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • DeepLocPro:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • data available for N315

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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