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FunGene: 08-OCT-2024
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus JSNZ
- locus tag: JSNZ_000338
- pan locus tag?: SAUPAN001985000
- symbol: JSNZ_000338
- pan gene symbol?: tcyP
- synonym:
- product: L-cystine transporter
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: JSNZ_000338
- symbol: JSNZ_000338
- product: L-cystine transporter
- replicon: chromosome
- strand: -
- coordinates: 370632..372020
- length: 1389
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID:
- RefSeq:
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1021
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1321
1381ATGAATGCTTTTCTTACACTGATTAATATTATTGTATTGGTGATTTTCATCGTAATATTG
CACATGATGGCTCGCAAACATATATCTTTTGCGAAACGTGTGTTTACAGCTTTAGGTATC
GGCATTGTATTTGGCGTGTTATTACATCTTGTCTATGGAACACATTCGAATGTTATTACA
TCAACAAGTGACTGGTTCAACATTGTCTGACAAGGTTACGTTGCATTGTTGCAAATGATT
GTGATGCCTTTAATTTTCATTTCTATTGTCGCTGCATTCACTAAAATTCAAATCGGAGAA
AAGTTTGCTAAAATTGGTAGTCTCATTTTTATCTTTTTAATTGGCACTGTCACCATTGCT
GCAATTGTTGGTGTTGTTTATGCCTTGGTGTTTGGTTTAGATGCATCAACAATTAATCTT
GGTAACGCTGAACAAGCACGTGGAAGCGAAATTGCTAAACAAGCGAAAGATTTAACAGCA
CATACGTTACCACAACAAATTTTGGAATTATTGCCTAAAAATCCATTCTTAGATTTCACT
GGACAACGTGCAACTTCCACGATTGCTGTCGTGATATTTGCTTCGTTTATAGGATTTGCT
TATTTACGCGTAGCACGCAAACAACCTGATCATGGTGAATTGCTTAAGCGTGCGATTGAC
GCTATCTATTCACTAGTAATGGCGATTGTGACGTTCGTCTTACGTTTAACGCCATACGGT
GTATTAGCAATTATGGCCAACACATTATCGACAAGTGACTTTGGCGCCATTTGGACTTTA
GGAAAATTCTTAATCGCATCGTACGCTGCATTAATTACGATGTATATCATTCACTTAATT
ATTTTAAGCCTGTTAGGTATTAGCCCAATTCGCTATGTTAAAAAGACTTTGGAAGTATTA
ATCTTTGCATTCACATCACGCTCAAGCGCGGGTGCCTTACCATTGAATGTACAAACACAA
ACAAGACGTCTAGGCGTGCCAGAAGGTATTGCCAATTTTGCTGCGACATTTGGATTGTCG
ATTGGACAAAATGGTTGTGCAGGCATTTACCCTGCCATGCTTGCAATTATGGTCGCACCC
GTCGCTAATGTAGAAATTGATTTACAATTTATTGTAACGTTAATCGCTGTCGTGATTATT
AGTTCATTCGGCGTTGCTGGCGTCGGTGGCGGGGCTACATTTGCATCCATATTGGTGTTG
TCAACGTTAAACTTGCCAGTCGCTTTAGCCGGCGTGCTCATCTCCGTTGAACCATTGATT
GACATGGGTAGAACAGCATTAAACGTGAACGATTCAATGCTAGCTGGTACAGGTACCGCC
AAGTTAACTAAACATTGGGATAAAGATACTTTCGAATCAAATGATAATGCTGCATTAACT
TCACACTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: JSNZ_000338
- symbol: JSNZ_000338
- description: L-cystine transporter
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, Newman, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
- ↑ 1.0 1.1 Hannes Wolfgramm, Larissa Milena Busch, Jöran Tebben, Henry Mehlan, Lisa Hagenau, Thomas Sura, Tilly Hoffmüller, Elisa Bludau, Manuela Gesell Salazar, Alexander Reder, Stephan Michalik, Leif Steil, Kristin Surmann, Ulrike Mäder, Silva Holtfreter, Uwe Völker
Integrated genomic and proteomic analysis of the mouse-adapted Staphylococcus aureus strain JSNZ.
Curr Res Microb Sci: 2025, 9;100489
[PubMed:41146725] [WorldCat.org] [DOI] (I e)