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NCBI: 01-DEC-2025

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: EGJ38_001404 [new locus tag: EGJ38_RS07010 ]
  • pan locus tag?: SAUPAN003844000
  • symbol: EGJ38_001404
  • pan gene symbol?: —
  • synonym:
  • alternate name: JSNZ_001404
  • product: N-acetyltransferase family protein

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: EGJ38_001404 [new locus tag: EGJ38_RS07010 ]
  • symbol: EGJ38_001404
  • product: N-acetyltransferase family protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1419646..1420155
  • length: 510
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq: MGT2423366 NCBI
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGATCCGTCTAGGTAAAATGTCAGATTTAGATCAAATCTTAAATCTAGTAGAAGAAGCA
    AAAGAATTAATGAAAGAACACGACAACGAGCAATGGGACGATCAGTACCCTCTTTTAGAA
    CATTTTGAAGAAGATATTGCTAAAGATTATTTGTACGTATTAGAGGAAAATGACAAAATT
    TATGGCTTTATTGTTGTCGACCAAGACCAAGCAGAATGGTATGATGACATTGACTGGCCA
    GTAAATAGAGAAGGCGCCTTTGTTATTCATCGATTAACTGGTTCGAAAGAATATAAAGGA
    GCTGCTACAGAATTATTCAATTATGTTATTGATGTAGTTAAAGCACGTGGTGCAGAAGTT
    ATTTTAACGGACACCTTTGCGTTAAACAAACCTGCACAAGGTTTATTTGCCAAATTTGGA
    TTTCATAAGATCGGTGAACAATTAATGGAATATCCGCCATATGATAAAGGTGAACCATTT
    TATGCATATTATAAAAATTTAAAAGAATAG
    60
    120
    180
    240
    300
    360
    420
    480
    510


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: EGJ38_001404 [new locus tag: EGJ38_RS07010 ]
  • symbol: EGJ38_001404
  • description: N-acetyltransferase family protein
  • length: 169
  • theoretical pI: 4.24871
  • theoretical MW: 19860.2
  • GRAVY: -0.538462

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein synthesis Ribosomal proteins: synthesis and modification ribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 24.6)
  • TheSEED: data available for N315, NCTC8325, Newman, USA300_FPR3757
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 44.2)
    and 5 more
    Acetyltransf_4; Acetyltransferase (GNAT) domain (PF13420; HMM-score: 34.2)
    Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 25.6)
    Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 25.4)
    Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 18.7)
    FR47; FR47-like protein (PF08445; HMM-score: 14.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9976
    • Cytoplasmic Membrane Score: 0.0003
    • Cell wall & surface Score: 0.0003
    • Extracellular Score: 0.0017
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.001472
    • TAT(Tat/SPI): 0.000162
    • LIPO(Sec/SPII): 0.000177
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: MGT2423366 NCBI
  • UniProt:

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKIGEQLMEYPPYDKGEPFYAYYKNLKE

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

  1. ↑ Blanca Taboada, Karel Estrada, Ricardo Ciria, Enrique Merino
    Operon-mapper: a web server for precise operon identification in bacterial and archaeal genomes.
    Bioinformatics: 2018, 34(23);4118-4120
    [PubMed:29931111] [WorldCat.org] [DOI] (I p)

⊟Relevant publications[edit | edit source]

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