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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS11550 [old locus tag: SA2006 ]
- pan locus tag?: SAUPAN005623000
- symbol: SA_RS11550
- pan gene symbol?: —
- synonym:
- product: toxin
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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421ATGAAACTAAAATCATTTGTTACTGCCACTTTAGCATTGGGATTATTATCAACAGTAGGT
GCAGCTTTACCGAGTCATGAAGCATCTGCAGATAGTAATAACGGTTATAAGGAATTGACA
ATGGATGGAAAACACACTGTGCCTTACACGATCTCAGTAGATGGTATTACTGCATTACAT
CGAACTTACTTTGTTTTTCCAGAAAATAAAAAGGTACTTTATCAAGAAATTGACAGTAAA
GTAAAAAATGAATTAGCTTCACAACGTGGTGTTACAACAGAAAAAATTAATAATGCACAA
ACAGCAACGTATACACTTACTTTGAATGATGGTAATAAAAAAGTAGTGAATCTAAAGAAA
AATGACGACGCTAAAAATTCAATTGATCCAAGTACAATCAAACAAATACAAATTGTAGTT
AAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS11550 [old locus tag: SA2006 ]
- symbol: SA_RS11550
- description: toxin
- length: 141
- theoretical pI: 9.78823
- theoretical MW: 15426.5
- GRAVY: -0.371631
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SA2006
- PFAM: Ant-toxin_C (CL0386) MAP; MAP domain (PF03642; HMM-score: 113.8)and 1 moreno clan defined Tail_tube; Phage tail tube protein (PF10618; HMM-score: 13.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 9.68
- Cellwall Score: 0.17
- Extracellular Score: 0.16
- Internal Helix: 1
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 30 aa
- SP(Sec/SPI): 0.992495
- TAT(Tat/SPI): 0.005388
- LIPO(Sec/SPII): 0.001824
- Cleavage Site: CS pos: 30-31. ASA-DS. Pr: 0.9265
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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