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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS03640 [old locus tag: SA0636 ]
- pan locus tag?: SAUPAN002565000
- symbol: SA_RS03640
- pan gene symbol?: —
- synonym:
- product: DUF188 domain-containing protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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421GTGACACATATTATTATTGATGGAGATGCTTGTCCTGTTGTTGATTCTATTATAGATTTA
ACAACTGAGACAGGCATTTTTGTGACAATTATTCGGAGCTTCAGCCATTTTTCGAACCAA
TTATATCCTCCACATGTATCAACATTATATGTTGATGATGGACCAGATGCAGTTGATTAC
AAAATTGTTCAATTATCAACGAAGGATGATATCGTAGTCACTCAAGATTATGGACTCGCA
AGTTTATTAGTCGACAAAGTCTTAATTGTCATGCATCATAATGGGAAGATATACAATTCC
AAAAATATTCAACAACTATTAGATAAACGATATATAAATGCACAAATTAGAAAACAAGGT
GGTCGCCACAAAGGTCCCCCACCTTTTACAAAGCAAGATCAAAAAGTGTTTGAACAATCA
CTATTAAAAGTCATTCATCGAATTAAGGAGCTGGATTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS03640 [old locus tag: SA0636 ]
- symbol: SA_RS03640
- description: DUF188 domain-containing protein
- length: 152
- theoretical pI: 7.23211
- theoretical MW: 17239.7
- GRAVY: -0.201974
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SA0636
- PFAM: PIN (CL0280) DUF188; Uncharacterized BCR, YaiI/YqxD family COG1671 (PF02639; HMM-score: 137.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001461
- TAT(Tat/SPI): 0.000095
- LIPO(Sec/SPII): 0.000234
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTHIIIDGDACPVVDSIIDLTTETGIFVTIIRSFSHFSNQLYPPHVSTLYVDDGPDAVDYKIVQLSTKDDIVVTQDYGLASLLVDKVLIVMHHNGKIYNSKNIQQLLDKRYINAQIRKQGGRHKGPPPFTKQDQKVFEQSLLKVIHRIKELD
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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