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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003766000
- symbol?: trpF
- synonym:
- description?: N-(5'-phosphoribosyl)anthranilate isomerase
- N-(5'-phosphoribosyl)anthranilate isomerase
- N-5'-phosphoriborylanthranilate isomerase
- phosphoribosylanthranilate isomerase
- N-(5'phosphoribosyl)anthranilate (PRA)isomerase
- N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein
- N-5'-phosphoribosyl-anthranilate isomerase
- transcription termination/antitermination factor NusG
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4063501..4064025
- synteny block?: BlockID0028280
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1325
08BA02176:
C248_1409 (trpF)
11819-97:
MS7_1328
6850:
RSAU_001252 (trpF)
71193:
ST398NM01_1372
ECT-R 2:
ECTR2_1228
ED133:
SAOV_1381
ED98:
SAAV_1353 (trpF)
HO 5096 0412:
SAEMRSA15_12190 (trpF)
JH1:
SaurJH1_1461
JH9:
SaurJH9_1432
JKD6008:
SAA6008_01336 (trpF)
JKD6159:
SAA6159_01237 (trpF)
LGA251:
SARLGA251_12800 (trpF)
M013:
M013TW_1317
MRSA252:
SAR1384 (trpF)
MSHR1132:
SAMSHR1132_12140
MSSA476:
SAS1311
Mu3:
SAHV_1359 (trpF)
Mu50:
SAV1371 (trpF)
MW2:
MW1258 (trpF)
RF122:
SAB1226 (trpF)
ST398:
SAPIG1372 (trpF)
T0131:
SAT0131_01443 (sbi)
TCH60:
HMPREF0772_11836 (trpF)
TW20:
SATW20_13710 (trpF)
USA300_TCH1516:
USA300HOU_1306 (trpF)
VC40:
SAVC_06105
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MMKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVM
N315 -MKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVM
NCTC8325 -MKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVM
Newman MMKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVM
USA300_FPR3757 -MKLKFCGFTSIKDVTAASQLPIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVM
***********************************************************
COL VNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKITKALAADENIIQNINKY
N315 VNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKITKALAADENIIQNINKY
NCTC8325 VNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKITKALAADENIIQNINKY
Newman VNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKITKALAADENIIQNINKY
USA300_FPR3757 VNPDLTTIEHVLSNTSINTIQLHGTESIDFIQEIKKKYSSIKITKALAADENIIQNINKY
************************************************************
COL KGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGGINSENIQTVNQLKLSHQGY
N315 KGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGGINSENIQTVNQLKLSHQGY
NCTC8325 KGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGGINSENIQTVNQLKLSHQGY
Newman KGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGGINSENIQTVNQLKLSHQGY
USA300_FPR3757 KGFVDLFIIDTPSVSYGGTGQTYDWTILKHIKDIPYLIAGGINSENIQTVNQLKLSHQGY
************************************************************
COL DLASGIEVNGRKDIEKMTAIVNIVKGDRDNE
N315 DLASGIEVNGRKDIEKMTAIVNIVKGDRDNE
NCTC8325 DLASGIEVNGRKDIEKMTAIVNIVKGDRDNE
Newman DLASGIEVNGRKDIEKMTAIVNIVKGDRDNE
USA300_FPR3757 DLASGIEVNGRKDIEKMTAIVNIVKGDRDNE
*******************************