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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS01450 [old locus tag: SACOL0286 ]
  • pan locus tag?: SAUPAN001200000
  • symbol: SACOL_RS01450
  • pan gene symbol?:
  • synonym:
  • product: TIGR01741 family protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS01450 [old locus tag: SACOL0286 ]
  • symbol: SACOL_RS01450
  • product: TIGR01741 family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 325964..326464
  • length: 501
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (325964..326464) NCBI
  • BioCyc: SACOL_RS01450 BioCyc
  • MicrobesOnline: see SACOL0286

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGACTTTCGAAGAAAAATTAAGTGAAATGTATAGCGAGATTGCGAATAAGATTAGCAGC
    ATGATACCGGTAGAGTGGGAAAAGGTATATGCAATGGCATATATAGATGACGGAGGAGGA
    GAAGTGTTCTACTATTACACAGAACCTGGAAGTAATGAATTATACTACTATACTAGTGTA
    TTAAATAAATATGATATATCGGAATCGGAATTTATGGATTCAGTGTATGAGTTGTATAAA
    CAATTTCAAAATTTAAGGAATTTATTTAAAGAAGAAGGACATGAACCATGGACATCATGC
    GAATTTGACTTTACAAGAGAAGGTGAATTAAAAGTTTCATTTGATTATATTGATTGGATA
    AATTCAGAATTTGGTCAAGTAGGTCGACAAAATTACTATAAGTATAGAAAATTTGGAATT
    TTACCAGAAACGGAATATGAAATTAATAAAGTTAAAGAAATCGAGCAATATGTTAAAGAG
    CAAGAAGAAGCTGAACAATAG
    60
    120
    180
    240
    300
    360
    420
    480
    501

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS01450 [old locus tag: SACOL0286 ]
  • symbol: SACOL_RS01450
  • description: TIGR01741 family protein
  • length: 166
  • theoretical pI: 4.04826
  • theoretical MW: 20042
  • GRAVY: -0.798193

Function[edit | edit source]

  • TIGRFAM:
    conserved hypothetical protein (TIGR01741; HMM-score: 249)
  • TheSEED: see SACOL0286
  • PFAM:
    no clan defined DUF600; Protein of unknown function, DUF600 (PF04634; HMM-score: 159.6)
    and 1 more
    DUF4296; Domain of unknown function (DUF4296) (PF14129; HMM-score: 14.5)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.019722
    • TAT(Tat/SPI): 0.002238
    • LIPO(Sec/SPII): 0.00097
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MTFEEKLSEMYSEIANKISSMIPVEWEKVYAMAYIDDGGGEVFYYYTEPGSNELYYYTSVLNKYDISESEFMDSVYELYKQFQNLRNLFKEEGHEPWTSCEFDFTREGELKVSFDYIDWINSEFGQVGRQNYYKYRKFGILPETEYEINKVKEIEQYVKEQEEAEQ

Experimental data[edit | edit source]

  • experimentally validated: see SACOL0286
  • protein localization: see SACOL0286
  • quantitative data / protein copy number per cell: see SACOL0286
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]