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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40


Summary[edit | edit source]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: S399 [1]
  • symbol: S399
  • synonym:
  • product: RNA feature, 5'UTR of SAOUHSC_00957, yybP-ykoY motif

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: misc_RNA
  • locus tag: S399 [1]
  • symbol: S399
  • product: RNA feature, 5'UTR of SAOUHSC_00957, yybP-ykoY motif
  • replicon: chromosome
  • strand: +
  • coordinates: 931851..932071
  • length: 221
  • essential: unknown

Accession numbers[edit | edit source]

  • SRD: srn_2200 SRD

Phenotype[edit | edit source]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    AAAAGGTATACTATGATGTATCAAATGAATAACCTATGGCATTTTGTCAGAGGGGAGTAA
    CTTAAGAATCATGACCGTATAAATGATTCGACACTTTATCGTCATTACGAAGATATCTTC
    CGGTAAAGTGGGCAATTTAAATTGCTTAGTGAGACCTTTGCTATTTATTTAGCATAGGTC
    TTTTTGTTTGTACTTAACTTATTTATTTAAAGGAGTTGTAC
    60
    120
    180
    221

Interactions

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]


Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

  1. 1.0 1.1 1.2 1.3 1.4 Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
    Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
    PLoS Genet: 2016, 12(4);e1005962
    [PubMed:27035918] [WorldCat.org] [DOI] (I e)
  2. Michael Dambach, Melissa Sandoval, Taylor B Updegrove, Vivek Anantharaman, L Aravind, Lauren S Waters, Gisela Storz
    The ubiquitous yybP-ykoY riboswitch is a manganese-responsive regulatory element.
    Mol Cell: 2015, 57(6);1099-1109
    [PubMed:25794618] [WorldCat.org] [DOI] (I p)

Relevant publications[edit | edit source]