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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

organism: Staphylococcus aureus COL

locus tag: SACOL_RS07855 [old locus tag: SACOL1541 ]

pan locus tag^?: SAUPAN004031000

symbol: SACOL_RS07855

pan gene symbol^?: fur

synonym:
product: transcriptional repressor

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: SACOL_RS07855 [old locus tag: SACOL1541 ]
symbol: SACOL_RS07855
product: transcriptional repressor
replicon: chromosome
strand: -
coordinates: 1578551..1579000
length: 450
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Location: NC_002951 (1578551..1579000) NCBI
BioCyc: SACOL_RS07855 BioCyc
MicrobesOnline: see SACOL1541

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

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TTGGAAGAACGATTAAATCGCGTTAAGCAACAATTACAACAATCATCATATAAGCTAACG
CCACAACGCGAAGCTACTGTTAGAGTTCTAATTGAAAATGAAAAAGATCATCTAAGTGCT
GAAGACGTATATCTGAAAGTAAAAGATAAAGCGCCTGAAATTGGCTTGGCGACAGTATAC
AGAACGTTAGAGTTGTTAGCTGAACTAAAAGTTGTCGACAAAATTAACTTTGGTGATGGC
GTCGCTCGTTTTGATTTAAGAAAAGAAGGCGCAAAACATTTCCACCATCATTTAGTATGT
ATGGAATGTGGTCGTGTAGATGAAATCGATGAAGATTTGTTACCAGAAGTTGAAAATCGA
GTTGAAAATGAGTTCAATTTTAAAATTTTAGATCATCGTTTAACTTTCCATGGTGTGTGT
GAAACGTGCCAAGCTAAAGGTAAAGGATAG
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450

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SACOL_RS07855 [old locus tag: SACOL1541 ]
symbol: SACOL_RS07855
description: transcriptional repressor
length: 149
theoretical pI: 6.15861
theoretical MW: 17243.6
GRAVY: -0.575168

⊟Function[edit | edit source]

TIGRFAM:
TheSEED: see SACOL1541
PFAM:
HTH (CL0123) FUR; Ferric uptake regulator family (PF01475; HMM-score: 132.7)

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:
genes regulated by Fur*, TF important in Iron homeostasis: see SACOL1541

⊟Localization[edit | edit source]

⊞
PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
⊞
DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.8889
- Cytoplasmic Membrane Score: 0.0016
- Cell wall & surface Score: 0.0009
- Extracellular Score: 0.1086
LocateP:
⊞
SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001453
- TAT(Tat/SPI): 0.000154
- LIPO(Sec/SPII): 0.000214
predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

GI: 446314836 NCBI
RefSeq: WP_000392691 NCBI
UniProt: see SACOL1541

⊟Protein sequence[edit | edit source]

MEERLNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVYLKVKDKAPEIGLATVYRTLELLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCMECGRVDEIDEDLLPEVENRVENEFNFKILDHRLTFHGVCETCQAKGKG

⊟Experimental data[edit | edit source]

experimentally validated: see SACOL1541
protein localization: see SACOL1541
quantitative data / protein copy number per cell: see SACOL1541
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

data available for N315

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: see SACOL1541

⊟Protein stability[edit | edit source]

half-life: no data available

⊞Biological Material[edit | edit source]

⊞Other Information[edit | edit source]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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