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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • pan locus tag?: SAUPAN002712000
  • symbol: SACOL_RS04340
  • pan gene symbol?: secG
  • synonym:
  • product: protein-export membrane protein SecG

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • symbol: SACOL_RS04340
  • product: protein-export membrane protein SecG
  • replicon: chromosome
  • strand: +
  • coordinates: 871883..872116
  • length: 234
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (871883..872116) NCBI
  • BioCyc: SACOL_RS04340 BioCyc
  • MicrobesOnline: see SACOL0844

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    ATGCATACATTTTTAATCGTATTATTAATCATTGATTGTATTGCATTAATAACTGTTGTA
    CTACTCCAAGAAGGTAAAAGCAGTGGACTTTCAGGTGCCATCAGTGGTGGTGCTGAGCAG
    TTATTCGGTAAACAAAAACAACGTGGCGTCGATTTATTCTTAAATAGATTAACAATTATT
    TTATCAATATTATTTTTTGTACTTATGATTTGCATAAGTTATCTTGGTATGTAA
    60
    120
    180
    234

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS04340 [old locus tag: SACOL0844 ]
  • symbol: SACOL_RS04340
  • description: protein-export membrane protein SecG
  • length: 77
  • theoretical pI: 8.22953
  • theoretical MW: 8399.2
  • GRAVY: 1.17922

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein fate Protein and peptide secretion and trafficking preprotein translocase, SecG subunit (TIGR00810; HMM-score: 82.4)
  • TheSEED: see SACOL0844
  • ⊞PFAM:
    no clan defined SecG; Preprotein translocase SecG subunit (PF03840; HMM-score: 84.1)
    and 1 more
    DUF3671; Fam-L, Fam-M like protein (PF12420; HMM-score: 8.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 2
  • ⊞DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9963
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0037
  • LocateP:
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.07348
    • TAT(Tat/SPI): 0.00059
    • LIPO(Sec/SPII): 0.060001
  • predicted transmembrane helices (TMHMM): 2

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAEQLFGKQKQRGVDLFLNRLTIILSILFFVLMICISYLGM

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL0844
  • protein localization: see SACOL0844
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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