Jump to navigation
Jump to search
NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA2457 [new locus tag: SA_RS14070 ]
- pan locus tag?: SAUPAN006409000
- symbol: SA2457
- pan gene symbol?: cap1A
- synonym:
- product: capsular polysaccharide synthesis protein CapA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA2457 [new locus tag: SA_RS14070 ]
- symbol: SA2457
- product: capsular polysaccharide synthesis protein CapA
- replicon: chromosome
- strand: -
- coordinates: 2768262..2768924
- length: 663
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1125386 NCBI
- RefSeq: NP_375783 NCBI
- BioCyc: see SA_RS14070
- MicrobesOnline: 104809 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661ATGAAAGAAAAGTTTGATTTAGTAAAACTATTAAATATTCTAAAGAAGAATATTAAATTA
TTGCTTATTTTACCGGCAATATGTCTTGTAGTAAGTACGGCATTAACCTTCTTTGTTATG
CCTGACAAATATACTGCTTCTACTCAAATACTAGTGAACATGAAAAAGTCCTCAAGTGAT
TTAGCTTTCCAAAATGTTCAAAGTAGTTTGCAGTCTGTTAATACATATACGGAAATTATC
AAAAGTCCAAGAATTCTAGATAAAGTATCTAGAGAGTTTGATGGTCAGTATTCAACAGCT
GAGTTGAATTCGTTTTTAAAAGTAACCAATCAAACAAACTCTCAGATTATTACTGTATCA
GTTACAACTGGGAATAAATCTGAATCTGACAAAATTGTTAATAGAATATCTAAAGTTTTT
GCACATGATATGCCTAAAATTATGAGTGTTGATAATGTTACGATACTTTCCTCAGCACAT
GATAATGCTGTAAAAGTATCTCCAATAGTATCTGTCAACTTAGTGATCAGCATTATTGTT
GGTATTGTTTTAGCAATATTGATTATTTTCTTAAAAGAATTATTAGATAAGCGTATTAAG
ACAGAAGAAGATGTTGAATCGCAACTAGGATTACCTATTTTAGGTTCAATACAAAAATTT
TAA60
120
180
240
300
360
420
480
540
600
660
663
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA2457 [new locus tag: SA_RS14070 ]
- symbol: SA2457
- description: capsular polysaccharide synthesis protein CapA
- length: 220
- theoretical pI: 9.83197
- theoretical MW: 24397.6
- GRAVY: 0.285
⊟Function[edit | edit source]
- ⊞TIGRFAM: Transport and binding proteins Carbohydrates, organic alcohols, and acids polysaccharide export protein, MPA1 family (TIGR01006; HMM-score: 239)and 4 more
- ⊞TheSEED :
- Tyrosine-protein kinase transmembrane modulator EpsC
Cell Wall and Capsule Capsular and extracellular polysacchrides Exopolysaccharide Biosynthesis Tyrosine-protein kinase transmembrane modulator EpsCand 1 more - ⊞PFAM: no clan defined Wzz; Chain length determinant protein (PF02706; HMM-score: 85.8)and 4 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SA2455 < SA2456 < SA2457
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available