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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1353 [new locus tag: SA_RS07665 ]
- pan locus tag?: SAUPAN004077000
- symbol: SA1353
- pan gene symbol?: xseB
- synonym:
- product: exodeoxyribonuclease VII small subunit
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1353 [new locus tag: SA_RS07665 ]
- symbol: SA1353
- product: exodeoxyribonuclease VII small subunit
- replicon: chromosome
- strand: -
- coordinates: 1563808..1564038
- length: 231
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124193 NCBI
- RefSeq: NP_374636 NCBI
- BioCyc: see SA_RS07665
- MicrobesOnline: 103662 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGACTAAAGAAACGCAAAGTTTTGAAGAAATGATGCAAGAATTAGAGCAAATTGTTCAA
AAATTAGATAATGAAACAGTATCTTTAGAGGAATCATTAGATTTATATCAACGTGGTATG
AAACTATCAGCAGCTTGTGACACAACTTTAAAAAATGCCGAAAAAAAGGTGAATGACTTA
ATAAAAGAAGAAGCTGAGGATGTAAAAAATGACGAATCTACCGATGAATAA60
120
180
231
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1353 [new locus tag: SA_RS07665 ]
- symbol: SA1353
- description: exodeoxyribonuclease VII small subunit
- length: 76
- theoretical pI: 3.9341
- theoretical MW: 8759.64
- GRAVY: -0.977632
⊟Function[edit | edit source]
- ⊞reaction: EC 3.1.11.6? ExPASy
- ⊞TIGRFAM: DNA metabolism Degradation of DNA exodeoxyribonuclease VII, small subunit (TIGR01280; EC 3.1.11.6; HMM-score: 81)and 2 more
- TheSEED :
- Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)
- ⊞PFAM: no clan defined Exonuc_VII_S; Exonuclease VII small subunit (PF02609; HMM-score: 75.8)and 12 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTKETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIKEEAEDVKNDESTDE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available