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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS13660 [old locus tag: NWMN_2371 ]
- pan locus tag?: SAUPAN006038000
- symbol: NWMN_RS13660
- pan gene symbol?: —
- synonym:
- product: carboxymuconolactone decarboxylase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS13660 [old locus tag: NWMN_2371 ]
- symbol: NWMN_RS13660
- product: carboxymuconolactone decarboxylase family protein
- replicon: chromosome
- strand: -
- coordinates: 2609569..2609991
- length: 423
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421ATGCCGTATAATTACAAGAAACAAAATGGAGAGTTAATGTCTGTAATGAGCCAAGGTGAA
AAGTTTATTCATCAATCACCCGTTAATGATGAACTTAGTGCATTGATTAAGTTATTAATT
TCTAAAATTAACGGTTGTCATTATTGTGTTGATATCCATAAAAAAGAATTAAAGGAATTG
GGTGTAACACAAATGAAAATTGATGAAGTCTTGAGTTTTAGACATTTAGATTTATTTACT
GATCAAGAAAAAGTGACGCTTGAATTTGCAGAAATGTTAAATTCAATCAAAGACTTTAAG
AAGTTTGAAATTATTGACCGGCTAAAATCATTTTATGATGAAGAACAAATTATTGATCTT
GTCTTTGTTGTAAACCAAATTAACGGTTGGAACAGATTAAATATTATTAGTGATAGACTA
TAA60
120
180
240
300
360
420
423
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS13660 [old locus tag: NWMN_2371 ]
- symbol: NWMN_RS13660
- description: carboxymuconolactone decarboxylase family protein
- length: 140
- theoretical pI: 5.65611
- theoretical MW: 16484
- GRAVY: -0.263571
⊟Function[edit | edit source]
- ⊞reaction: EC 1.11.1.15? ExPASy
- ⊞TIGRFAM: uncharacterized peroxidase-related enzyme (TIGR01926; HMM-score: 41.8)Unknown function General alkylhydroperoxidase AhpD family core domain (TIGR00778; HMM-score: 40.8)and 3 more
- TheSEED: see NWMN_2371
- ⊞PFAM: AhpD-like (CL0423) CMD; Carboxymuconolactone decarboxylase family (PF02627; HMM-score: 41.8)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKELGVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDLVFVVNQINGWNRLNIISDRL
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: SigB see NWMN_2371
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available