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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA0716 [new locus tag: SA_RS04075 ]
  • pan locus tag?: SAUPAN002680000
  • symbol: lgt
  • pan gene symbol?: lgt
  • synonym:
  • product: prolipoprotein diacylglyceryl transferase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA0716 [new locus tag: SA_RS04075 ]
  • symbol: lgt
  • product: prolipoprotein diacylglyceryl transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 819382..820221
  • length: 840
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGGGTATTGTATTTAACTATATAGATCCTGTGGCATTTAACTTAGGACCACTGAGTGTA
    CGATGGTATGGAATTATCATTGCTGTCGGAATATTACTTGGTTACTTTGTTGCACAACGT
    GCACTAGTTAAAGCAGGATTACATAAAGATACTTTAGTAGATATTATTTTTTATAGTGCA
    CTATTTGGATTTATCGCGGCACGAATCTATTTTGTGATTTTCCAATGGCCATATTACGCG
    GAAAATCCAAGTGAAATTATTAAAATATGGCATGGTGGAATAGCAATACATGGTGGTTTA
    ATAGGTGGCTTTATTGCTGGTGTTATTGTATGTAAAGTGAAAAATTTAAACCCATTTCAA
    ATTGGTGATATCGTTGCGCCAAGTATAATTTTAGCGCAAGGAATTGGACGCTGGGGTAAC
    TTTATGAATCACGAGGCACATGGTGGACCGGTGTCACGCGCTTTTTTAGAACAATTACAT
    TTGCCTAATTTTATAATAGAAAATATGTATATTAACGGCCAATATTATCATCCAACATTC
    TTATATGAATCCATTTGGGATGTCGCTGGATTTATTATCTTAGTTAATATTCGTAAACAT
    TTAAAATTAGGAGAAACATTCTTTTTATATTTAACTTGGTATTCAATTGGTCGATTCTTT
    ATAGAAGGATTACGTACAGATAGCTTAATGCTCACAAGTAATATTAGAGTTGCACAATTA
    GTATCAATTCTTTTAATTTTAATAAGTATAAGTTTAATTGTATATAGAAGGATTAAGTAT
    AATCCACCGTTGTATAGCAAAGTTGGGGCGCTTCCATGGCCAACAAAAAAAGTGAAGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA0716 [new locus tag: SA_RS04075 ]
  • symbol: Lgt
  • description: prolipoprotein diacylglyceryl transferase
  • length: 279
  • theoretical pI: 9.85929
  • theoretical MW: 31582.2
  • GRAVY: 0.570609

⊟Function[edit | edit source]

  • reaction:
    EC 2.4.99.-?  ExPASy
  • TIGRFAM:
    Genetic information processing Protein fate Protein modification and repair prolipoprotein diacylglyceryl transferase (TIGR00544; EC 2.4.99.-; HMM-score: 246.7)
  • TheSEED  :
    • Prolipoprotein diacylglyceryl transferase
    Protein Metabolism Protein processing and modification Lipoprotein Biosynthesis  Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)
  • PFAM:
    no clan defined LGT; Prolipoprotein diacylglyceryl transferase (PF01790; HMM-score: 267.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • ⊞DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9999
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0001
  • ⊞LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003509
    • TAT(Tat/SPI): 0.000162
    • LIPO(Sec/SPII): 0.002101
  • predicted transmembrane helices (TMHMM): 5

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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