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Revision as of 15:33, 10 March 2016 by AureoSysAdmin (talk | contribs) (Text replacement - "gene Genbank" to "gene RefSeq")
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NCBI date : _

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS04475 [old locus tag: SA0783 ]
  • pan locus tag?: SAUPAN003020000
  • symbol: SA_RS04475
  • pan gene symbol?: —
  • synonym:
  • product: anion permease

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS04475 [old locus tag: SA0783 ]
  • symbol: SA_RS04475
  • product: anion permease
  • replicon: chromosome
  • strand: +
  • coordinates: 890013..890840
  • length: 828
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq: WP_000927632 NCBI

⊟Phenotype[edit | edit source]

  • Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGTTATTAACAATTACATTATTAGTTTTAATCGGAGGTTTGTCAGCGATTATAGGGTCT
    ATCGTAGGCATTGGAGGCGGTATTATTATCGTTCCAACAATGGTTTACCTCGGTGTTGAA
    CATGGATTACTACATAATATTACAACACAAGTAGCGATAGGGACGTCTTCAGTCATTCTA
    ATTGTGACAGGACTTTCTTCATCACTTGGATATTTAAAAACAAAACAAGTTGATATTAAA
    AATGGTTCCATCTTTTTATTTGGACTATTACCAGGTTCATTGCTTGGGTCCTTCATTAGT
    AGATATTTAACATTTGAGTCATTTAATTTATATTTTGGTATCTTTTTAATTTTCGTAGCC
    ATTTTATTAATGGTAAGAAATAAGATTAAACCGTTTAAAATTTTCGATAAACCCAAGTAT
    GAAAAGACTTATGTAGACGCTAAAGGTAAAACATATCATTATAGTGTGCCACCATTGTTT
    GCTTTTATTACAACGTTTTTAATTGGTATATTGACAGGTTTATTTGGTATTGGAGGTGGC
    GCACTAATGACGCCACTAATGCTTATTGTATTTAGATTTCCACCTCATGTAGCTGTTGGA
    ACAAGTATGATGATGATTTTCTTTTCAAGTGTCATGAGTTCTATAGGGCACATTGCTCAA
    GGTCACGTAGCTTGGGGTTATGCAATCATTTTAATTATTTCTAGTTATTTTGGTGCGAAA
    ATCGGTGTCAAAGTGAATCAATCAATTAAGTCAGATACGGTAGTAACATTATTGAGAACA
    GTAATGTTGTTAATGGGTATATATTTAATTATTCGAGCGTTGATTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    828

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS04475 [old locus tag: SA0783 ]
  • symbol: SA_RS04475
  • description: anion permease
  • length: 275
  • theoretical pI: 10.3726
  • theoretical MW: 29779.9
  • GRAVY: 1.02982

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SA0783
  • PFAM:
    LysE (CL0292) TauE; Sulfite exporter TauE/SafE (PF01925; HMM-score: 173.3)

⊟Structure, modifications & interactions[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • interaction partners:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 8
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.0165
    • TAT(Tat/SPI): 0.000243
    • LIPO(Sec/SPII): 0.031416
  • predicted transmembrane helices (TMHMM): 8

⊟Accession numbers[edit | edit source]

  • GI: 446850376 NCBI
  • UniProt: see SA0783
  • protein Genbank : _
  • RefSeq: WP_000927632 NCBI

⊟Protein sequence[edit | edit source]

  • MLLTITLLVLIGGLSAIIGSIVGIGGGIIIVPTMVYLGVEHGLLHNITTQVAIGTSSVILIVTGLSSSLGYLKTKQVDIKNGSIFLFGLLPGSLLGSFISRYLTFESFNLYFGIFLIFVAILLMVRNKIKPFKIFDKPKYEKTYVDAKGKTYHYSVPPLFAFITTFLIGILTGLFGIGGGALMTPLMLIVFRFPPHVAVGTSMMMIFFSSVMSSIGHIAQGHVAWGYAIILIISSYFGAKIGVKVNQSIKSDTVVTLLRTVMLLMGIYLIIRALI

⊟Peptides[edit | edit source]

  • experimentally validated: data available for NCTC8325

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • sigma factors : _
  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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