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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS02775 [old locus tag: SAUSA300_0518 ]
  • pan locus tag?: SAUPAN002301000
  • symbol: SAUSA300_RS02775
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS02775 [old locus tag: SAUSA300_0518 ]
  • symbol: SAUSA300_RS02775
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 579639..580163
  • length: 525
  • essential: unknown other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAGAACGTTACTTAATCATTGATGGATACAATATGATAGGACAATCACCAACGCTA
    AGCGCCATTGCAAAAGAGAATTTAGAAGAAGCTAGAATGCAATTAATAGATGCAATTGCA
    AATTATAATGCAGTTATTTCAGATGAAATTATTTGTGTTTTCGATGCTTATGACCAATCG
    GGTGTTGAAAGAGAATACATGTATCATGGCGTTAAAACGATTTTTACCAAGGAAAAAGAA
    ACAGCTGATAGTTTCATAGAACGTTATGTTTATGAACTTTATGACAAGCATACTAAGCAT
    ATTACAGTTGTAACAAGTGATATGAGTGAGCAACATGCTATCTTTGGATCAGGTGCATAT
    AGAATATCATCTCGCGAAATGTGGAGAGATTTAAAAGAAAATGAAATTGATGTGAGTAAA
    TCATTAGATGATATAAGTGAAAACAAGCCAAGAACTCGAATTCCGTTATCTTCTGAAATC
    CTTGCAGAATTTGAAAAAATACGAAGAGGACATCATAAGAAATGA
    60
    120
    180
    240
    300
    360
    420
    480
    525

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SAUSA300_RS02775 [old locus tag: SAUSA300_0518 ]
  • symbol: SAUSA300_RS02775
  • description: hypothetical protein
  • length: 174
  • theoretical pI: 5.36049
  • theoretical MW: 20249.7
  • GRAVY: -0.58046

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SAUSA300_0518
  • PFAM:
    PIN (CL0280) NYN_YacP; YacP-like NYN domain (PF05991; HMM-score: 165.3)
    and 1 more
    Chelatase (CL0043) Oxidored_nitro; Nitrogenase component 1 type Oxidoreductase (PF00148; HMM-score: 15.2)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.013249
    • TAT(Tat/SPI): 0.000452
    • LIPO(Sec/SPII): 0.000773
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MKERYLIIDGYNMIGQSPTLSAIAKENLEEARMQLIDAIANYNAVISDEIICVFDAYDQSGVEREYMYHGVKTIFTKEKETADSFIERYVYELYDKHTKHITVVTSDMSEQHAIFGSGAYRISSREMWRDLKENEIDVSKSLDDISENKPRTRIPLSSEILAEFEKIRRGHHKK

Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]