⊟Summary[edit | edit source]
- pan ID?: SAUPAN006028000
- symbol?: cntM
- synonym:
- description?: staphylopine dehydrogenase CntM
- strand?: -
- coordinates?: 6084949..6086166
- synteny block?: BlockID0047720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2405
08BA02176:
C248_2518
11819-97:
MS7_2481
6850:
RSAU_002306
71193:
ST398NM01_2518
ECT-R 2:
ECTR2_2325
ED133:
SAOV_2518c
ED98:
SAAV_2534
HO 5096 0412:
SAEMRSA15_23660
JH1:
SaurJH1_2544
JH9:
SaurJH9_2495
JKD6008:
SAA6008_02509
JKD6159:
SAA6159_02365
LGA251:
SARLGA251_22480
M013:
M013TW_2428
MRSA252:
SAR2555
MSHR1132:
SAMSHR1132_22930
MSSA476:
SAS2359
Mu3:
SAHV_2452
Mu50:
SAV2468
MW2:
MW2392
RF122:
SAB2351c
ST398:
SAPIG2518
T0131:
SAT0131_02667 (gid)
TCH60:
HMPREF0772_10721
TW20:
SATW20_25960
USA300_TCH1516:
USA300HOU_2459
VC40:
SAVC_11210
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----------------------------MVGRASTSEKSKRLYQAYKKEKQFEVKIQNE
N315 MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLYQAYKKEKQFEVKIQNE
NCTC8325 -----------------------------MVGRASTSEKSKRLYQAYKKEKQFEVKIQNE
Newman MSKLLMIGTGPVAIQLANICYLKSDYEIDMVGRASTSEKSKRLYQAYKKEKQFEVKIQNE
USA300_FPR3757 -----------------------------MVGRASTSEKSKRLYQAYKKAKQFEVKIQNE
******************** **********
COL AHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISP
N315 AHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISP
NCTC8325 AHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISP
Newman AHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISP
USA300_FPR3757 AHQHLEGKFEINRLYKDVKNVKGEYETVVMACTADAYYDTLQQLSLETLQSVKHVILISP
************************************************************
COL TFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNS
N315 TFGSQMIVEQFMSKFSQDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNS
NCTC8325 TFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNS
Newman TFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNS
USA300_FPR3757 TFGSQMIVEQFMSKFNKDIEVISFSTYLGDTRIVDKEAPNHVLTTGVKKKLYMGSTHSNS
***************.:*******************************************
COL TMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVY
N315 TMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVY
NCTC8325 TMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVY
Newman TMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVY
USA300_FPR3757 TMCQRISALAEQLKIQLEVVESPLHAETRNSSLYVHPPLFMNDFSLKAIFEGTDVPVYVY
************************************************************
COL KLFPEGPITMTLIREMRLMWKEMMVILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEH
N315 KLFPEGPITMTLIREMRLMWKEMMAILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEH
NCTC8325 KLFPEGPITMTLIREMRLMWKEMMVILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEH
Newman KLFPEGPITMTLIREMRLMWKEMMVILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEH
USA300_FPR3757 KLFPEGPITMTLIREMRLMWKEMMVILQAFRVPSVNLLQFMVKENYPVRPETLDEGDIEH
************************.***********************************
COL FEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPS
N315 FEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPS
NCTC8325 FEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPS
Newman FEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPS
USA300_FPR3757 FEILPDILQEYLLYVRYTAILIDPFSQPDENGHYFDFSAVPFKQVYKNEQDVVQIPRMPS
************************************************************
COL EDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKDMHQDQHLSSQFNTNLFEGDKA
N315 EDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKDMHQDQQLSSQFNTNLFEGDKA
NCTC8325 EDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKDMHQDQHLSSQFNTNLFEGDKA
Newman EDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKDMHQDQHLSSQFNTNLFEGDKA
USA300_FPR3757 EDYYRTAMIQHIGKMLGIKTPMIDQFLTRYEASCQAYKDMHQDQHLSSQFNTNLFEGDKA
********************************************:***************
COL LVTKFLEINRTLS
N315 LVTKFLEINRTLS
NCTC8325 LVTKFLEINRTLS
Newman LVTKFLEINRTLS
USA300_FPR3757 LVTKFLEINRTLS
*************