PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006007000
• symbol^?: pnbA
• synonym:
• description^?: carboxylesterase/lipase family protein

  descriptions from strain specific annotations:

  • carboxylesterase/lipase family protein
  • para-nitrobenzyl esterase
  • para-nitrobenzyl esterase chain A
  • carboxylesterase type B
  • alpha/beta hydrolase fold family protein
  • carboxylesterase
  • carboxylesterase family protein
  • putative carboxylesterase
• strand^?: +
• coordinates^?: 6066674..6068026
• synteny block^?: BlockID0047510
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2459 (pnbA)
N315:
SA2240
NCTC8325:
SAOUHSC_02751
Newman:
NWMN_2350
USA300_FPR3757:
SAUSA300_2396 (pnbA)
04-02981:
SA2981_2388
08BA02176:
C248_2502
11819-97:
MS7_2465
6850:
RSAU_002291 (pnbA)
71193:
ST398NM01_2504
ECT-R 2:
ECTR2_2309
ED133:
SAOV_2502
ED98:
SAAV_2518 (pnbA)
HO 5096 0412:
SAEMRSA15_23510
JH1:
SaurJH1_2527
JH9:
SaurJH9_2478
JKD6008:
SAA6008_02493 (pnbA)
JKD6159:
SAA6159_02349 (pnbA)
LGA251:
SARLGA251_22320
M013:
M013TW_2414
MRSA252:
SAR2541
MSHR1132:
SAMSHR1132_22790
MSSA476:
SAS2343
Mu3:
SAHV_2435
Mu50:
SAV2451
MW2:
MW2375
RF122:
SAB2333
ST398:
SAPIG2504
T0131:
SAT0131_02651 (aur)
TCH60:
HMPREF0772_10737 (pnbA)
TW20:
SATW20_25800
USA300_TCH1516:
USA300HOU_2441 (pnbA)
VC40:
SAVC_11130

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQ
  N315            MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQ
  NCTC8325        MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQ
  Newman          MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQ
  USA300_FPR3757  MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQ
                  ************************************************************
  
  COL             PDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGKAELYQP
  N315            PDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQP
  NCTC8325        PDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQP
  Newman          PDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGKAELYQP
  USA300_FPR3757  PDNKLEDFFSSQSTTFTEHEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQP
                  *****************************************************.******
  
  COL             AHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDA
  N315            AHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDA
  NCTC8325        AHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDA
  Newman          AHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDA
  USA300_FPR3757  AHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDA
                  ************************************************************
  
  COL             NNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLESARNKAQHFQKMMLDY
  N315            NNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLKSARNKAQYFQKMMRDY
  NCTC8325        NNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLESARNKAQHFQKMMLDY
  Newman          NNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLESARNKAQHFQKMMLDY
  USA300_FPR3757  NNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLESARNKAQHFQKMMLDY
                  *******************************************:*******:***** **
  
  COL             LDTDDVTSLSTNDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNNYPTTKPIFACYTKD
  N315            LDTDDVTSLSTDDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNDYPTTKPIFACYTKD
  NCTC8325        LDTDDVTSLSTNDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNNYPTTKPIFACYTKD
  Newman          LDTDDVTSLSTNDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNNYPTTKPIFACYTKD
  USA300_FPR3757  LDTDDVTSLSTNDILMLMAKLKQSRGPSKGLDLIYAPIKTDYIQNNYPTTKPIFACYTKD
                  ***********:*********************************:**************
  
  COL             EGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQL
  N315            EGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQHL
  NCTC8325        EGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQL
  Newman          EGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQL
  USA300_FPR3757  EGDIYITSEQKKLSPQRFIDIMELNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQL
                  **********************************************************:*
  
  COL             NIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQ
  N315            NIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQ
  NCTC8325        NIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQ
  Newman          NIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQ
  USA300_FPR3757  NIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQ
                  ************************************************************
  
  COL             MQNDLANFAKSGKMPWPMYHNERRYYRTYQ
  N315            MQNDLANFAKSGKMPWPMYHNERRYYRTYQ
  NCTC8325        MQNDLANFAKSGKMPWPMYHNERRYYRTYQ
  Newman          MQNDLANFAKSGKMPWPMYHNERRYYRTYQ
  USA300_FPR3757  MQNDLANFAKSGKMPWPMYHNERRYYRTYQ
                  ******************************