⊟Summary[edit | edit source]
- pan ID?: SAUPAN005569000
- symbol?: sfnaC
- synonym:
- description?: alanine racemase
- alanine racemase
- amino acid racemase, putative
- staphyloferrin A biosynthesis protein SfaC
- alanine racemase, N-domain family
- alanine racemase domain-containing protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5709951..5711021
- synteny block?: BlockID0043290
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2116
08BA02176:
C248_2216
11819-97:
MS7_2201
6850:
RSAU_002022
71193:
ST398NM01_2238
ECT-R 2:
ECTR2_2039
ED133:
SAOV_2225c
ED98:
SAAV_2239
HO 5096 0412:
SAEMRSA15_20830
JH1:
SaurJH1_2248
JH9:
SaurJH9_2209
JKD6008:
SAA6008_02216
JKD6159:
SAA6159_02089
LGA251:
SARLGA251_19730
M013:
M013TW_2144
MRSA252:
SAR2269
MSHR1132:
SAMSHR1132_20100
MSSA476:
SAS2079
Mu3:
SAHV_2162
Mu50:
SAV2178
MW2:
MW2104
RF122:
SAB2059c
ST398:
SAPIG2238
T0131:
SAT0131_02347
TCH60:
HMPREF0772_11013
TW20:
SATW20_23130
USA300_TCH1516:
USA300HOU_2170
VC40:
SAVC_09760
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD
N315 MAHVNINISKIKYNAKVLQTVFQSKNIQFTPVIKCIAGDRTIVESLKALGINHVAESRLD
NCTC8325 MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD
Newman MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD
USA300_FPR3757 MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD
**************************:*********************************
COL NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM
N315 NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM
NCTC8325 NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM
Newman NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM
USA300_FPR3757 NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM
************************************************************
COL VDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV
N315 VDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV
NCTC8325 VDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV
Newman VDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV
USA300_FPR3757 VDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV
************************************************************
COL EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT
N315 EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT
NCTC8325 EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT
Newman EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT
USA300_FPR3757 EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT
************************************************************
COL LEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG
N315 LEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG
NCTC8325 LEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG
Newman LEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG
USA300_FPR3757 LEAEILEIKPRVNTQTHESFLQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG
************************************************************
COL QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPAMVNHY
N315 QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPAMVNQY
NCTC8325 QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPAMVNHY
Newman QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPAMVNHY
USA300_FPR3757 QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPAMVNHY
******************************************************:*