⊟Summary[edit | edit source]
- pan ID?: SAUPAN005434000
- symbol?: deoC2
- synonym:
- description?: deoxyribose-phosphate aldolase
- deoxyribose-phosphate aldolase
- 2-deoxyribose-5-phosphate aldolase
- Deoxyribose-phosphate aldolase 2
- putative deoxyribose-phosphate aldolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5592090..5592752
- synteny block?: BlockID0042290
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2077
08BA02176:
C248_2153 (deoC2)
11819-97:
MS7_2155
6850:
RSAU_001975 (deoC2)
71193:
ST398NM01_2179
ECT-R 2:
ECTR2_1993 (deoC)
ED133:
SAOV_2177c
ED98:
SAAV_2192 (deoC2)
HO 5096 0412:
SAEMRSA15_20450 (deoC2)
JH1:
SaurJH1_2211
JH9:
SaurJH9_2173
JKD6008:
SAA6008_02176 (deoC2)
JKD6159:
SAA6159_02051 (deoC2)
LGA251:
SARLGA251_19380 (deoC2)
M013:
M013TW_2097
MRSA252:
SAR2225 (deoC2)
MSHR1132:
SAMSHR1132_19600
MSSA476:
SAS2040
Mu3:
SAHV_2121
Mu50:
SAV2137
MW2:
MW2061
RF122:
SAB2021c (deoC2)
ST398:
SAPIG2179 (deoC)
T0131:
SAT0131_02302
TCH60:
HMPREF0772_11053 (deoC2)
TW20:
SATW20_22750 (deoC2)
USA300_TCH1516:
USA300HOU_2126 (deoC2)
VC40:
SAVC_09560
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTV
N315 MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTV
NCTC8325 MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTV
Newman MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTV
USA300_FPR3757 MNSAKLIDHTLLKPESTRTQIDQIIDEAKAYHFKSVCVNPTHVKYAAERLADSEVLVCTV
************************************************************
COL IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
N315 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
NCTC8325 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
Newman IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
USA300_FPR3757 IGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHT
************************************************************
COL VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADIEVK
N315 VKVIIETVLLDHDEIVKASELTKVAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
NCTC8325 VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADIEVK
Newman VKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADIEVK
USA300_FPR3757 VKVIIETVLLDHDEIVKASELTKTAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVK
***********************.********************************:***
COL ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
N315 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
NCTC8325 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
Newman ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
USA300_FPR3757 ASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
****************************************