⊟Summary[edit | edit source]
- pan ID?: SAUPAN005345000
- symbol?: —
- synonym:
- description?: bacterial membrane flanked domain protein
- bacterial membrane flanked domain protein
- membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5519284..5519763
- synteny block?: BlockID0041420
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2015
08BA02176:
C248_2086
11819-97:
MS7_2091
6850:
RSAU_001914
71193:
ST398NM01_2115
ECT-R 2:
ECTR2_1930
ED133:
SAOV_2116c
ED98:
SAAV_2127
HO 5096 0412:
SAEMRSA15_19840
JH1:
SaurJH1_2149
JH9:
SaurJH9_2111
JKD6008:
SAA6008_02113
JKD6159:
SAA6159_01989
LGA251:
SARLGA251_18770
M013:
M013TW_2033
MRSA252:
SAR2162
MSHR1132:
SAMSHR1132_18990
MSSA476:
SAS1979
Mu3:
SAHV_2059
Mu50:
SAV2074
MW2:
MW1998
RF122:
SAB1959c
ST398:
SAPIG2115
T0131:
SAT0131_02231 (argH)
TCH60:
HMPREF0772_11121
TW20:
SATW20_22140
USA300_TCH1516:
USA300HOU_2069
VC40:
SAVC_09255
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFEWPHYLLYILLVLGALS
N315 MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFEWPHYLLYILLVLGALS
NCTC8325 MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFEWPHYLLYILLVLGALS
Newman MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFEWPHYLLYILLVLGALS
USA300_FPR3757 MSDYTKLTKSPKSALLYYYITNGLEFILSVAVYVIFYFIWLRFEWPHYLLYILLVLGALS
************************************************************
COL TLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIERLQYLSIKSNPISKVLNLY
N315 TLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIERLQYLSIKSNPISKVLNLY
NCTC8325 TLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIERLQYLSIKSNPISKVLNLY
Newman TLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIERLQYLSIKSNPISKVLNLY
USA300_FPR3757 TLKLFIKPLWQYHCRFYKVDQLSVQYRTSFFIYKEETSRIERLQYLSIKSNPISKVLNLY
************************************************************
COL KVGFMTAGHTIYLPMMSHDDVKIIEERTMSNLRGVESDV
N315 KVGFMTAGHTIYLPMMSHDDVKIIEARTMSNLRGVESDV
NCTC8325 KVGFMTAGHTIYLPMMSHDDVKIIEERTMSNLRGVESDV
Newman KVGFMTAGHTIYLPMMSHDDVKIIEERTMSNLRGVESDV
USA300_FPR3757 KVGFMTAGHTIYLPMMSHDDVKIIEERTMSNLRGVESDV
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