⊟Summary[edit | edit source]
- pan ID?: SAUPAN005339000
- symbol?: mazF
- synonym:
- description?: mRNA interferase MazF
- mRNA interferase MazF
- PemK family protein
- PemK family DNA-binding protein
- toxin mazF, putative
- type II toxin-antitoxin system PemK/MazF family toxin
- Programmed cell death toxin YdcE
- Toxin MazF
- chpK
- endoribonuclease EndoA
- PemK family transcriptional regulator
- PemK-like protein
- transcriptional modulator of MazE/toxin MazF
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5515021..5515383
- synteny block?: BlockID0041360
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2009 (ydcE)
08BA02176:
C248_2080
11819-97:
MS7_2085 (mazF)
6850:
RSAU_001908
71193:
ST398NM01_2109
ECT-R 2:
ECTR2_1924
ED133:
SAOV_2110c
ED98:
SAAV_2121
HO 5096 0412:
SAEMRSA15_19780
JH1:
SaurJH1_2143
JH9:
SaurJH9_2105
JKD6008:
SAA6008_02107 (mazF)
JKD6159:
SAA6159_01983 (mazF)
LGA251:
SARLGA251_18710
M013:
M013TW_2027
MRSA252:
SAR2156
MSHR1132:
SAMSHR1132_18930
MSSA476:
SAS1973
Mu3:
SAHV_2053
Mu50:
SAV2068
MW2:
MW1992
RF122:
SAB1953c
ST398:
SAPIG2109
T0131:
SAT0131_02225
TCH60:
HMPREF0772_11127
TW20:
SATW20_22080
USA300_TCH1516:
USA300HOU_2063 (pemK)
VC40:
SAVC_09225
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE
N315 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE
NCTC8325 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE
Newman MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE
USA300_FPR3757 MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVE
************************************************************
COL IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
N315 IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
NCTC8325 IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
Newman IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
USA300_FPR3757 IEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
************************************************************