⊟Summary[edit | edit source]
- pan ID?: SAUPAN004999000
- symbol?: pmtA
- synonym:
- description?: ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- phenol-soluble modulin export ABC transporter ATP-binding protein PmtA
- PSM ABC-transporter PmtA subunit
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter, ATP-binding protein
- ABC transporter family protein
- ABC transporter protein
- multidrug ABC transporter ATPase
- putative ABC transporter ATP-binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5180484..5181380
- synteny block?: BlockID0038800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1891
08BA02176:
C248_2020
11819-97:
MS7_1968
6850:
RSAU_001828 (pmtA)
71193:
ST398NM01_2054
ECT-R 2:
ECTR2_1805
ED133:
SAOV_2035
ED98:
SAAV_2000
HO 5096 0412:
SAEMRSA15_18490
JH1:
SaurJH1_2023
JH9:
SaurJH9_1990
JKD6008:
SAA6008_01963
JKD6159:
SAA6159_01864
LGA251:
SARLGA251_18170
M013:
M013TW_1970
MRSA252:
SAR2025
MSHR1132:
SAMSHR1132_17770
MSSA476:
SAS1857
Mu3:
SAHV_1918
Mu50:
SAV1933
MW2:
MW1874
RF122:
SAB1869c
ST398:
SAPIG2054
T0131:
SAT0131_02063
TCH60:
HMPREF0772_11208
TW20:
SATW20_19270
USA300_TCH1516:
USA300HOU_1936
VC40:
SAVC_08925
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIR
N315 MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIR
NCTC8325 MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIR
Newman MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIR
USA300_FPR3757 MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIR
************************************************************
COL VLEEDMALNPIELKNRIGFVYSENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDL
N315 VLEEDMALNPIELKNSIGFVYSENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDL
NCTC8325 VLEEDMALNPIELKNRIGFVYSENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDL
Newman VLEEDMALNPIELKNRIGFVYSENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDL
USA300_FPR3757 VLEEDMALNPIELKNRIGFVYSENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDL
*************** ********************************************
COL PINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENK
N315 PINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENK
NCTC8325 PINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENK
Newman PINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENK
USA300_FPR3757 PINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENK
************************************************************
COL TIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGAIEDLDDELASLLIY
N315 TIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGATEDLDDELASLLIY
NCTC8325 TIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGAIEDLDDELASLLIY
Newman TIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGAIEDLDDELASLLIY
USA300_FPR3757 TIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGAIEDLDDELASLLIY
********************************************** *************
COL EEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
N315 EEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
NCTC8325 EEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
Newman EEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
USA300_FPR3757 EEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
**********************************************************